RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SOWAHAQ2M3V2 549 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ZC3H12BQ5HYM0 836 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 P3H2Q8IVL5 708 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 PPP3R2Q96LZ3 170 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 FAIM2Q9BWQ8 316 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 RETREG1Q9H6L5 497 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 AGO3Q9H9G7 860 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ADAMTS5Q9UNA0 930 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 NDUFAF1Q9Y375 327 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ATXN2Q99700 1313 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 PRMT5O14744 637 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 CD3EAPO15446 510 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ZNF623O75123 536 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 FOXD4Q12950 439 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 TMEM110Q86TL2 294 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ZFP28Q8NHY6 868 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 MRPL48Q96GC5 212 aaKnown RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 GBA3Q9H227 469 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 WRAP73Q9P2S5 460 aaPredicted RBP16.9■□□□□ 0.3
PCDHA13-202ENST00000409494 TULP2O00295 520 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 CCL16O15467 120 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SEC22BO75396 215 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 RPP40O75818 363 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 ZCCHC18P0CG32 403 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 UNGP13051 313 aaPredicted RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 LBPP18428 481 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 LRPAP1P30533 357 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SERPINB5P36952 375 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 FRG1Q14331 258 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 CES3Q6UWW8 571 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 LPCAT2Q7L5N7 544 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 TAC4Q86UU9 113 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 OSBPL2Q9H1P3 480 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 DUS2Q9NX74 493 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 NDUFA13Q9P0J0 144 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 RGPD5Q99666 1765 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 AGPSO00116 658 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 DDX3YO15523 660 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 UNC5CO95185 931 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 RPA3P35244 121 aaPredicted RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 GPD2P43304 727 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 HSPA14Q0VDF9 509 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 DMC1Q14565 340 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 RNF43Q68DV7 783 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 FNDC5Q8NAU1 212 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 EIF2B3Q9NR50 452 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 hCG_2014768A0A024R1R8 64 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 PAPSS1O43252 624 aaPredicted RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 CCDC166P0CW27 439 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 RANBP1P43487 201 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SERPINB10P48595 397 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 DOK6Q6PKX4 331 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 IZUMO2Q6UXV1 221 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 CHST9Q7L1S5 443 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 SERINC5Q86VE9 423 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 KCTD15Q96SI1 283 aaPredicted RBP16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 BCO2Q9BYV7 579 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 POMKQ9H5K3 350 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 MAFFQ9ULX9 164 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 CPQQ9Y646 472 aa16.89■□□□□ 0.29
PCDHA13-202ENST00000409494 KRT87PA6NCN2 255 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 ALBP02768 609 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 CAP1Q01518 475 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 HLA-DQA1Q5Y7H0 255 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 ASZ1Q8WWH4 475 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 ABHD8Q96I13 439 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 CCT7Q99832 543 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 IL1RL2Q9HB29 575 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 ARHGEF4Q9NR80 690 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 CROTQ9UKG9 612 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 LRCH1Q9Y2L9 728 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 LRIG2O94898 1065 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 AP2A1O95782 977 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 OTCP00480 354 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 PGS1Q32NB8 556 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 IL1RAPL1Q9NZN1 696 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 TMEM216Q9P0N5 145 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 ENTPD4Q9Y227 616 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 VNN1O95497 513 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 AMD1P17707 334 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 GPR17Q13304 367 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 GET4Q7L5D6 327 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 NR5A2O00482 541 aa16.88■□□□□ 0.29
PCDHA13-202ENST00000409494 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms