RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 HERPUD2Q9BSE4 406 aa20.04■□□□□ 0.8
PDLIM2-207ENST00000409417 NUSAP1Q9BXS6 441 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-207ENST00000409417 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-207ENST00000409417 SLCO1B1Q9Y6L6 691 aa20.04■□□□□ 0.8
PDLIM2-207ENST00000409417 A0A1W2PQU0 124 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 NEMP1O14524 444 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 HTRA2O43464 458 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 SOCS5O75159 536 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 TJP3O95049 919 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 XPAP23025 273 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 MAT2AP31153 395 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 AFF3P51826 1226 aaKnown RBP20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 ITKQ08881 620 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 ZNF284Q2VY69 593 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 TMEM259Q4ZIN3 620 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 AADACL2Q6P093 401 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 ZSCAN30Q86W11 494 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 TRIM58Q8NG06 486 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 DMTF1Q9Y222 760 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 ATP8A1Q9Y2Q0 1164 aa20.03■□□□□ 0.8
PDLIM2-207ENST00000409417 LNP1A1A4G5 178 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 UPK3BL1B0FP48 263 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 UPK3BL2E5RIL1 263 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 SPINT1O43278 529 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 HLA-DQB2P05538 268 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 POLR2LP62875 67 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 RPS21P63220 83 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 RACK1P63244 317 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 ZBTB17Q13105 803 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 ZNF211Q13398 564 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 SETMARQ53H47 684 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 MEI1Q5TIA1 1274 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 KIAA1161Q6NSJ0 714 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 ZC3H18Q86VM9 953 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 ZSWIM9Q86XI8 627 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 CNTD1Q8N815 330 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 HAUS1Q96CS2 278 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 TM9SF3Q9HD45 589 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 TTLL3Q9Y4R7 772 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 PCDHGC4Q9Y5F7 938 aa20.02■□□□□ 0.8
PDLIM2-207ENST00000409417 DMXL1Q9Y485 3027 aa20.02■□□□□ 0.79
PDLIM2-207ENST00000409417 HACD1B0YJ81 288 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 MTSS1O43312 755 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 ELP6Q0PNE2 266 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 XRCC4Q13426 336 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 RPS6KA1Q15418 735 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 AASDHQ4L235 1098 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 LRRC73Q5JTD7 316 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 SEL1L3Q68CR1 1132 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 B4GALNT4Q76KP1 1039 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 ARRDC2Q8TBH0 407 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 SERAC1Q96JX3 654 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 PCDH12Q9NPG4 1184 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 SEPT10Q9P0V9 454 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 GGT7Q9UJ14 662 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 ZFR2Q9UPR6 939 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 ITM2BQ9Y287 266 aa20.01■□□□□ 0.79
PDLIM2-207ENST00000409417 A0A1W2PQ67 120 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 ZSCAN12O43309 604 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 GRIA4P48058 902 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 ARHGAP8P85298 464 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 DSC2Q02487 901 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 NOMO1Q15155 1222 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 TEX44Q53QW1 395 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 ERAP2Q6P179 960 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 PAF1Q8N7H5 531 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 ACTL9Q8TC94 416 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 QKIQ96PU8 341 aaKnown RBP eCLIP20■□□□□ 0.79
PDLIM2-207ENST00000409417 RXFP3Q9NSD7 469 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 SPTBN4Q9H254 2564 aa20■□□□□ 0.79
PDLIM2-207ENST00000409417 ARHGAP33O14559 1287 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SLC31A1O15431 190 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 CSNK1EP49674 416 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 OTUD4Q01804 1114 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 NIPAL4Q0D2K0 466 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 TRAF2Q12933 501 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 TEAD4Q15561 434 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SLC45A4Q5BKX6 768 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 NAPEPLDQ6IQ20 393 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SLC6A18Q96N87 628 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 C1QTNF2Q9BXJ5 285 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SLC17A9Q9BYT1 436 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PCDHB9Q9Y5E1 797 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 RAI2Q9Y5P3 530 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 TRPM6Q9BX84 2022 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 GOLGA6L9A6NEM1 432 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 IGLON5A6NGN9 336 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PRAMEF26H0Y7S4 382 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 GDF9O60383 454 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PGLSO95336 258 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SYPP08247 313 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PRLRP16471 622 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 ENGP17813 658 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 ITIH2P19823 946 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PTPN3P26045 913 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 WASHC5Q12768 1159 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 SGCGQ13326 291 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 IHHQ14623 411 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms