RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ATXN3P54252 364 aaPredicted RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 PPP2CBP62714 309 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 PPP2CAP67775 309 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 LBRQ14739 615 aaKnown RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 RSPO4Q2I0M5 234 aaPredicted RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 NEK5Q6P3R8 708 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 GDPD4Q6W3E5 623 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 PARS2Q7L3T8 475 aaKnown RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 CDKL3Q8IVW4 592 aaPredicted RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 ZNF592Q92610 1267 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 FATE1Q969F0 183 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 RAB7BQ96AH8 199 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 QKIQ96PU8 341 aaKnown RBP eCLIP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 TUBGCP5Q96RT8 1024 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 FERMT1Q9BQL6 677 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 CPEB1Q9BZB8 566 aaKnown RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 ZDHHC5Q9C0B5 715 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 TMEM9BQ9NQ34 198 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 R3HDM2Q9Y2K5 976 aaKnown RBP21.01■□□□□ 0.95
C4orf48-201ENST00000409248 PLXNA2O75051 1894 aa21.01■□□□□ 0.95
C4orf48-201ENST00000409248 C10orf142B7Z368 130 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 MATN3O15232 486 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 LATO43561 262 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 GDF9O60383 454 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 NEBLO76041 1014 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 RBP3P10745 1247 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 ENGP17813 658 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 CSNK1DP48730 415 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 TAS2R38P59533 333 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 PRKD1Q15139 912 aaPredicted RBP21■□□□□ 0.95
C4orf48-201ENST00000409248 SETMARQ53H47 684 aaPredicted RBP21■□□□□ 0.95
C4orf48-201ENST00000409248 SLC45A4Q5BKX6 768 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 CFAP58Q5T655 872 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 STPG1Q5TH74 334 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 PRPF39Q86UA1 669 aaKnown RBP21■□□□□ 0.95
C4orf48-201ENST00000409248 TSEN2Q8NCE0 465 aaKnown RBP21■□□□□ 0.95
C4orf48-201ENST00000409248 C1orf216Q8TAB5 229 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 LRRN4Q8WUT4 740 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 CAPZA3Q96KX2 299 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 KLHL32Q96NJ5 620 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 PSKH2Q96QS6 385 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 FAM118BQ9BPY3 351 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 TM9SF3Q9HD45 589 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 RXFP3Q9NSD7 469 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 HAUS2Q9NVX0 235 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 CEP250Q9BV73 2442 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 CACNA1EQ15878 2313 aa21■□□□□ 0.95
C4orf48-201ENST00000409248 C16orf96A6NNT2 1141 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 RNF103O00237 685 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 ARHGAP33O14559 1287 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 SLC30A4O14863 429 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 MTSS1O43312 755 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 AP1G1O43747 822 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 GRIA4P48058 902 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 AP1S1P61966 158 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 RACK1P63244 317 aaKnown RBP20.99■□□□□ 0.95
C4orf48-201ENST00000409248 NSUN2Q08J23 767 aaKnown RBP eCLIP20.99■□□□□ 0.95
C4orf48-201ENST00000409248 HNRNPDQ14103 355 aaKnown RBP20.99■□□□□ 0.95
C4orf48-201ENST00000409248 MARC1Q5VT66 337 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
C4orf48-201ENST00000409248 MAML1Q92585 1016 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 RTKNQ9BST9 563 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 ATP13A3Q9H7F0 1226 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 HOMER3Q9NSC5 361 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 DKK3Q9UBP4 350 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 RNF14Q9UBS8 474 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 DMTF1Q9Y222 760 aa20.99■□□□□ 0.95
C4orf48-201ENST00000409248 GOLGA6L10A0A0M3HER8 536 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 RNGTTO60942 597 aaKnown RBP20.98■□□□□ 0.95
C4orf48-201ENST00000409248 PCDH8O95206 1070 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 PEX11BO96011 259 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SERPINA4P29622 427 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 PAFAH1B1P43034 410 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 MMP13P45452 471 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ID4P47928 161 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SLC10A7Q0GE19 358 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 GRIK2Q13002 908 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 PUM1Q14671 1186 aaKnown RBP eCLIP20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SIX1Q15475 284 aaPredicted RBP20.98■□□□□ 0.95
C4orf48-201ENST00000409248 NAPEPLDQ6IQ20 393 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 KIAA1161Q6NSJ0 714 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 B4GALNT4Q76KP1 1039 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SRLQ86TD4 932 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 HORMAD1Q86X24 394 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 KIF18AQ8NI77 898 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SLC35B2Q8TB61 432 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 HCAR2Q8TDS4 363 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 C1orf54Q8WWF1 131 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ATG4AQ8WYN0 398 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SKA1Q96BD8 255 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 RMDN1Q96DB5 314 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ZNF641Q96N77 438 aaPredicted RBP20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ORAI3Q9BRQ5 295 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 GTPBP2Q9BX10 602 aaKnown RBP20.98■□□□□ 0.95
C4orf48-201ENST00000409248 DLL3Q9NYJ7 618 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SMARCAL1Q9NZC9 954 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 SEPT10Q9P0V9 454 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ANKRD36A6QL64 1941 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 ADAMTS9Q9P2N4 1935 aa20.98■□□□□ 0.95
C4orf48-201ENST00000409248 A0A1W2PQU0 124 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms