RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 BLMHQ13867 455 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 TRIM72Q6ZMU5 477 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 SETD3Q86TU7 594 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 NLRP14Q86W24 1093 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 PHF13Q86YI8 300 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 TEX9Q8N6V9 391 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 NETO2Q8NC67 525 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 PIP4K2CQ8TBX8 421 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 GRIN3AQ8TCU5 1115 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 CCHCR1Q8TD31 782 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 SETD7Q8WTS6 366 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 OR8D1Q8WZ84 308 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 VOPP1Q96AW1 172 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 MCEEQ96PE7 176 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 BPIFA3Q9BQP9 254 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 ZDHHC5Q9C0B5 715 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 VIPAS39Q9H9C1 493 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 TM7SF3Q9NS93 570 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 OR12D3Q9UGF7 316 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 CABIN1Q9Y6J0 2220 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 TMEM131Q92545 1883 aa9.84□□□□□ -0.83
NIF3L1-202ENST00000409020 TBC1D3DA0A087WVF3 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3IA0A087WXS9 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3EA0A087X179 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3KA0A087X1G2 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 CFAP69A5D8W1 941 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3FA6NER0 549 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 LRRC72A6NJI9 287 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3LB9A6J9 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 MCF2LO15068 1137 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 LRIG2O94898 1065 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3HP0C7X1 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 GKP32189 559 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 PTPN9P43378 593 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 GRIA4P48058 902 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 CSE1LP55060 971 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 OXCT1P55809 520 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ARPC4P59998 168 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SLC14A1Q13336 389 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SHBQ15464 509 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TRIP6Q15654 476 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 PIP5KL1Q5T9C9 394 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3GQ6DHY5 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3CQ6IPX1 549 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 RWDD4Q6NW29 188 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 C22orf39Q6P5X5 142 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SLCO6A1Q86UG4 719 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TBC1D3Q8IZP1 549 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TTC30BQ8N4P2 665 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 CHCHD4Q8N4Q1 142 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 DCAF4L2Q8NA75 395 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ARRDC3Q96B67 414 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SLC39A3Q9BRY0 314 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 C2orf49Q9BVC5 232 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ATP13A1Q9HD20 1204 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 FCF1Q9Y324 198 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 A0A1W2PR77 199 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ILVBLA1L0T0 632 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 MYO1FO00160 1098 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 KPNA3O00505 521 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 LATO43561 262 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 PLRG1O43660 514 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TMCC1O94876 653 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 CER1O95813 267 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 FTH1P19P0C7X4 201 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ALOX15P16050 662 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 GPD1P21695 349 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 RACK1P63244 317 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 KRT83P78385 493 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 GNA12Q03113 381 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ST3GAL2Q16842 350 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 DNAJC24Q6P3W2 148 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 DPY19L3Q6ZPD9 716 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 STRADAQ7RTN6 431 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ADAT2Q7Z6V5 191 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 MARCH9Q86YJ5 346 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 OR6K2Q8NGY2 324 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 BAHD1Q8TBE0 780 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 KLK6Q92876 244 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SERAC1Q96JX3 654 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 MYOCQ99972 504 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 SELENOOQ9BVL4 669 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TTYH3Q9C0H2 523 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 YIPF3Q9GZM5 350 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 KLC2Q9H0B6 622 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 NOL6Q9H6R4 1146 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 FZD3Q9NPG1 666 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 AASDHPPTQ9NRN7 309 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 TOR4AQ9NXH8 423 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 PPARGC1AQ9UBK2 798 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ZMAT5Q9UDW3 170 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 ZNF148Q9UQR1 794 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 DAAM1Q9Y4D1 1078 aa9.83□□□□□ -0.84
NIF3L1-202ENST00000409020 BZW2Q9Y6E2 419 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms