RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 BBS12Q6ZW61 710 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 RABEPKQ7Z6M1 372 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 ADAT2Q7Z6V5 191 aaKnown RBP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 ZC3H18Q86VM9 953 aaKnown RBP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 TRIM69Q86WT6 500 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 P3H4Q92791 437 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 SERAC1Q96JX3 654 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 QKIQ96PU8 341 aaKnown RBP eCLIP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 TUBGCP5Q96RT8 1024 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 ORAI3Q9BRQ5 295 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 CPEB1Q9BZB8 566 aaKnown RBP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 POLR1EQ9GZS1 481 aaKnown RBP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 SUV39H2Q9H5I1 410 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 C10orf88Q9H8K7 445 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 TM9SF3Q9HD45 589 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 RBM22Q9NW64 420 aaKnown RBP eCLIP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 ZFR2Q9UPR6 939 aaKnown RBP10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 COQ6Q9Y2Z9 468 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
TSPAN9-202ENST00000407263 A0A1B0GVT2 93 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 MIF4GDA9UHW6 222 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 WNT9AO14904 365 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 SLC31A1O15431 190 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 LATO43561 262 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 JCHAINP01591 159 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 SERPINF2P08697 491 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 PYGMP11217 842 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 TIMP2P16035 220 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CSNK1DP48730 415 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CSNK1EP49674 416 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 ATXN3P54252 364 aaPredicted RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 IFI35P80217 286 aaPredicted RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 OTUD4Q01804 1114 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 HNRNPDQ14103 355 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 SEL1L2Q5TEA6 688 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 NAPEPLDQ6IQ20 393 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 KIAA1161Q6NSJ0 714 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 SLC23A3Q6PIS1 610 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 KDM7AQ6ZMT4 941 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 TTC7BQ86TV6 843 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 HORMAD1Q86X24 394 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 LRRC49Q8IUZ0 686 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 RNF10Q8N5U6 811 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 TEX26Q8N6G2 289 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CEP76Q8TAP6 659 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 TFB1MQ8WVM0 346 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 AGAP3Q96P47 875 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 TSGA13Q96PP4 275 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 KDM4CQ9H3R0 1056 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CAPN10Q9HC96 672 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 PCDH12Q9NPG4 1184 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 DKK3Q9UBP4 350 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 CDV3Q9UKY7 258 aaKnown RBP10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 SLC6A14Q9UN76 642 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 ATP8A1Q9Y2Q0 1164 aa10.37□□□□□ -0.75
TSPAN9-202ENST00000407263 PTPRZ1P23471 2315 aaPredicted RBP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 CEP250Q9BV73 2442 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 ZFC3H1O60293 1989 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 A8MX80 341 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 C10orf142B7Z368 130 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 H0Y8X5 98 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 H7C0C1 242 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 APOC4-APOC2K7ER74 178 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 AREL1O15033 823 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 AP1G1O43747 822 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 APOC2P02655 101 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 WNT1P04628 370 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 CTPS1P17812 591 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 PTPN3P26045 913 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 PTPN7P35236 360 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 MMP12P39900 470 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 CETN2P41208 172 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 CD86P42081 329 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 ATP5OP48047 213 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 GRIA4P48058 902 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 AFF3P51826 1226 aaKnown RBP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 CLDN2P57739 230 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 COPS2P61201 443 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 FAM193AP78312 1265 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 BNC1Q01954 994 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 NSUN2Q08J23 767 aaKnown RBP eCLIP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 FGL2Q14314 439 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 TEAD4Q15561 434 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 UGP2Q16851 508 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 RSPO4Q2I0M5 234 aaPredicted RBP10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 ZNF284Q2VY69 593 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 UAP1L1Q3KQV9 507 aa10.36□□□□□ -0.75
TSPAN9-202ENST00000407263 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms