RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TUBB6Q9BUF5 446 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 MFSD1Q9H3U5 465 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 IL21Q9HBE4 155 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 PCDH10Q9P2E7 1040 aa24.85■■□□□ 1.57
DNMT3A-206ENST00000406659 H0Y626 953 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 LDB2O43679 373 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CNPP09543 421 aaKnown RBP24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CTSAP10619 480 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CES1P23141 567 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 SCNN1BP51168 640 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CXorf57Q6NSI4 855 aaKnown RBP24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CNSTQ6PJW8 725 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 ZNF783Q6ZMS7 281 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 PTAR1Q7Z6K3 402 aaPredicted RBP24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 CARNMT1Q8N4J0 409 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 KCTD4Q8WVF5 259 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 SIKE1Q9BRV8 207 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 SCUBE2Q9NQ36 999 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 KCTD3Q9Y597 815 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 NUMBLQ9Y6R0 609 aa24.84■■□□□ 1.57
DNMT3A-206ENST00000406659 TYW5A2RUC4 315 aaKnown RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 INSIG1O15503 277 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 TGM5O43548 720 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 H2AFYO75367 372 aaKnown RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 C1RP00736 705 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 T-ENOLP0DO92 83 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 LEPRP48357 1165 aaKnown RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 RASSF2P50749 326 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 CLCN5P51795 746 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 PGGT1BP53609 377 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 CYTH1Q15438 398 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 CEP97Q8IW35 865 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 HJURPQ8NCD3 748 aaPredicted RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 PIWIL2Q8TC59 973 aaKnown RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 BRSK1Q8TDC3 778 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 CPSF2Q9P2I0 782 aaKnown RBP24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 CPQQ9Y646 472 aa24.83■■□□□ 1.57
DNMT3A-206ENST00000406659 A0A087X1B8 175 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 TRIM13O60858 407 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 CBX6O95503 412 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 GABRR2P28476 465 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 RGRP47804 291 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 ARSDP51689 593 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 TAS2R39P59534 338 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 LMNTD2Q8IXW0 634 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 MRPS31Q92665 395 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 TMA16Q96EY4 203 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 TRIB3Q96RU7 358 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 FCHO1O14526 889 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 SCAMP3O14828 347 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 CXCL14O95715 111 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 LRG1P02750 347 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 HNRNPH1P31943 449 aaKnown RBP24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 ZNF460Q14592 562 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 CTC1Q2NKJ3 1217 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 ZYG11AQ6WRX3 759 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 GALNT7Q86SF2 657 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 CILP2Q8IUL8 1156 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 OR6Y1Q8NGX8 325 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 PEX13Q92968 403 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 LRMDAQ9H2I8 198 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 ARIH1Q9Y4X5 557 aaPredicted RBP24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 ARL5AQ9Y689 179 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 KIAA1671Q9BY89 1806 aa24.82■■□□□ 1.56
DNMT3A-206ENST00000406659 CCL22O00626 93 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 AURKAO14965 403 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 HNRNPCL1O60812 293 aaKnown RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 HSF5Q4G112 596 aaPredicted RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 ALYREFQ86V81 257 aaKnown RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 CENPLQ8N0S6 344 aaPredicted RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 TTC16Q8NEE8 873 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 ADAMTS19Q8TE59 1207 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 INPP5DQ92835 1189 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 EXOC2Q96KP1 924 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 RILPQ96NA2 401 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 RAB3IPQ96QF0 476 aaPredicted RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 OMDQ99983 421 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 ZBED2Q9BTP6 218 aa24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 LSM7Q9UK45 103 aaKnown RBP24.81■■□□□ 1.56
DNMT3A-206ENST00000406659 PLXNA4Q9HCM2 1894 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TMEM114B3SHH9 223 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 OLFM2O95897 454 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 ATP5BP06576 529 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 PIRTP0C851 137 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 CR2P20023 1033 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 GLRBP48167 497 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 CYP4F8P98187 520 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 ACVR1Q04771 509 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TSNAXIP1Q2TAA8 658 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 ZNF789Q5FWF6 425 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 LRRC8EQ6NSJ5 796 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 Q6ZNB5 142 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 CCDC149Q6ZUS6 474 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TMC7Q7Z402 723 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 RNF135Q8IUD6 432 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 PARP9Q8IXQ6 854 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 NXNL1Q96CM4 212 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 RMDN1Q96DB5 314 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TSPAN17Q96FV3 270 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms