RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 SPA17Q15506 151 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 ODF2Q5BJF6 829 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 ANKRD20A8PQ5CZ79 823 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 SPATS2Q86XZ4 545 aaKnown RBP10.45□□□□□ -0.74
FAM49A-202ENST00000406434 ATPAF2Q8N5M1 289 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 PCDH19Q8TAB3 1148 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 CXorf40AQ8TE69 158 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 RAPGEF5Q92565 580 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 WRAP53Q9BUR4 548 aaKnown RBP10.45□□□□□ -0.74
FAM49A-202ENST00000406434 ATP13A3Q9H7F0 1226 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 RCOR3Q9P2K3 495 aaPredicted RBP10.45□□□□□ -0.74
FAM49A-202ENST00000406434 BTBD3Q9Y2F9 522 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 HYOU1Q9Y4L1 999 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 NCOR2Q9Y618 2525 aa10.45□□□□□ -0.74
FAM49A-202ENST00000406434 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
FAM49A-202ENST00000406434 MUSKO15146 869 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 RAD51BO15315 384 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 FLRT2O43155 660 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 MAFKO60675 156 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 TOP3BO95985 862 aaKnown RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 KDELR1P24390 212 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 SERPINA4P29622 427 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 MAN1A1P33908 653 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 CYLC1P35663 651 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 ARRB1P49407 418 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 MAXP61244 160 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 BCL2L1Q07817 233 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 NSUN2Q08J23 767 aaKnown RBP eCLIP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 OVGP1Q12889 678 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 CCDC157Q569K6 752 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 MARC1Q5VT66 337 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 Q6ZSR6 202 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PTAR1Q7Z6K3 402 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 IQCHQ86VS3 1027 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 BBS5Q8N3I7 341 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 OR13H1Q8NG92 308 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 FAM71BQ8TC56 605 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PDCD6IPQ8WUM4 868 aaKnown RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 RFFLQ8WZ73 363 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 VOPP1Q96AW1 172 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 ZNF641Q96N77 438 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 ZNF599Q96NL3 588 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 MAK16Q9BXY0 300 aaKnown RBP10.44□□□□□ -0.74
FAM49A-202ENST00000406434 NT5MQ9NPB1 228 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PCDH12Q9NPG4 1184 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 DKK3Q9UBP4 350 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PCOLCE2Q9UKZ9 415 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 INTUQ9ULD6 942 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 TFR2Q9UP52 801 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PCDHGB2Q9Y5G2 931 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 PCDHA13Q9Y5I0 950 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 HS3ST3A1Q9Y663 406 aa10.44□□□□□ -0.74
FAM49A-202ENST00000406434 ANKRD36A6QL64 1941 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 POM121BA6NF01 834 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 A8MX80 341 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 FPGTO14772 594 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 AREL1O15033 823 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 SPOPO43791 374 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 MFSD11O43934 449 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 NEBLO76041 1014 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 TM7SF2O76062 418 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 SPINK2P20155 84 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 COMTP21964 271 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 GRK6P43250 576 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 MMP13P45452 471 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 CSNK1DP48730 415 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ELP6Q0PNE2 266 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 PAFAH1B3Q15102 231 aaKnown RBP10.43□□□□□ -0.74
FAM49A-202ENST00000406434 SHBQ15464 509 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 UGP2Q16851 508 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 NCBP2-AS2Q69YL0 99 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ERAP2Q6P179 960 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 DBX2Q6ZNG2 339 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 GCNT7Q6ZNI0 430 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 CCDC170Q8IYT3 715 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 OXR1Q8N573 874 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 EID2Q8N6I1 236 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 PNPLA1Q8N8W4 532 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 TMEM145Q8NBT3 493 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 HCAR2Q8TDS4 363 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 BMFQ96LC9 184 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 PSKH2Q96QS6 385 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 PANX2Q96RD6 677 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 TUBGCP5Q96RT8 1024 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 CDC6Q99741 560 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ZNF670Q9BS34 389 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 C1QTNF2Q9BXJ5 285 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ERVMER34-1Q9H9K5 563 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 ANGPTL2Q9UKU9 493 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 COQ6Q9Y2Z9 468 aa10.43□□□□□ -0.74
FAM49A-202ENST00000406434 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms