RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 CSNK1DP48730 415 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 NEK3P51956 506 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 LIMK2P53671 638 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 PDE1BQ01064 536 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 IL9RQ01113 521 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 TRAF2Q12933 501 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 SEPT7Q16181 437 aaKnown RBP13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 FAM78AQ5JUQ0 283 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 ATXN7L2Q5T6C5 722 aaPredicted RBP13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 OR13J1Q8NGT2 312 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 FGF13Q92913 245 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 PEX13Q92968 403 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 ZNF317Q96PQ6 595 aaPredicted RBP13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 MCMBPQ9BTE3 642 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 APOL5Q9BWW9 433 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 ADGRE3Q9BY15 652 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 SLC2A11Q9BYW1 496 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■■■□□ 16
CEACAM1-206ENST00000403136 GGA2Q9UJY4 613 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 KCTD3Q9Y597 815 aa13.39□□□□□ -0.27
CEACAM1-206ENST00000403136 ANKRD66B4E2M5 251 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 GLP2RO95838 553 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 AHSGP02765 367 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 ALDOAP04075 364 aaKnown RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 PIRTP0C851 137 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 PABPC1P11940 636 aaKnown RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 AP1S1P61966 158 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 HYAL1Q12794 435 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 DMC1Q14565 340 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 DHCR24Q15392 516 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 FUT11Q495W5 492 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 DGKKQ5KSL6 1271 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 HHATQ5VTY9 493 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 LVRNQ6Q4G3 990 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 ZNF771Q7L3S4 317 aaPredicted RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 NDUFAF2Q8N183 169 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 SMARCD2Q92925 531 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 CHMP6Q96FZ7 201 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 ASB16Q96NS5 453 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 SLC13A1Q9BZW2 595 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 HS3ST2Q9Y278 367 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 MTO1Q9Y2Z2 717 aaKnown RBP13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
CEACAM1-206ENST00000403136 LINC01565O15544 149 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SLC7A4O43246 635 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 TIMM44O43615 452 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 FZD6O60353 706 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 FAM107AO95990 144 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 PRKCGP05129 697 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SRCP12931 536 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 GABRB3P28472 473 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SLC8A1P32418 973 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 CRHR1P34998 444 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 MAPK8P45983 427 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 CCT5P48643 541 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 ACVR1Q04771 509 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SULT2A1Q06520 285 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 CTBP1Q13363 440 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 UGP2Q16851 508 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 TCEAL5Q5H9L2 206 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 ANKRD54Q6NXT1 300 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SYCE2Q6PIF2 218 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 CDHR3Q6ZTQ4 885 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 KIAA0907Q7Z7F0 614 aaPredicted RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 DENND6AQ8IWF6 608 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 EFHBQ8N7U6 833 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 NAT16Q8N8M0 369 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 CALML6Q8TD86 181 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 STYXQ8WUJ0 223 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 PDCD6IPQ8WUM4 868 aaKnown RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 HDAC10Q969S8 669 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 MAGEB18Q96M61 343 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SRPK1Q96SB4 655 aaKnown RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 FAM167BQ9BTA0 163 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 C12orf65Q9H3J6 166 aaKnown RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 MKS1Q9NXB0 559 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 EVLQ9UI08 416 aaPredicted RBP13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 FBXO10Q9UK96 956 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 SPO11Q9Y5K1 396 aa13.37□□□□□ -0.27
CEACAM1-206ENST00000403136 ARL5AQ9Y689 179 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms