RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SFXN1Q9H9B4 322 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 SPHK2Q9NRA0 654 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ABCB8Q9NUT2 735 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 KCTD3Q9Y597 815 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 WNT6Q9Y6F9 365 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 NEDD8-MDP1E9PL57 170 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 PDHA1P08559 390 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 VIMP08670 466 aaKnown RBP25.82■■□□□ 1.72
CPNE1-205ENST00000401607 DHRS4L1P0CG22 281 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 TAC1P20366 129 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 GABRB3P28472 473 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 MAGEA12P43365 314 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 SLC12A1Q13621 1099 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 PITRM1Q5JRX3 1037 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ATXN7L2Q5T6C5 722 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-205ENST00000401607 FSTL4Q6MZW2 842 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 DENND6AQ8IWF6 608 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 FAM111AQ96PZ2 611 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 BBS2Q9BXC9 721 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 SLC13A1Q9BZW2 595 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 MTO1Q9Y2Z2 717 aaKnown RBP25.82■■□□□ 1.72
CPNE1-205ENST00000401607 NUP210Q8TEM1 1887 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-205ENST00000401607 PIRTP0C851 137 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 CCT5P48643 541 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 PDE1BQ01064 536 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 SEPT7Q16181 437 aaKnown RBP25.81■■□□□ 1.72
CPNE1-205ENST00000401607 NLRP9Q7RTR0 991 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 BRSK1Q8TDC3 778 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 VPS39Q96JC1 886 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 LRRC3BQ96PB8 259 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.81■■□□□ 1.722e-16■■■■□ 24.6
CPNE1-205ENST00000401607 C2orf16Q68DN1 1984 aa25.81■■□□□ 1.72
CPNE1-205ENST00000401607 CCDC85CA6NKD9 419 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 TIMM44O43615 452 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 CRHR1P34998 444 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 ARSDP51689 593 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 MPP1Q00013 466 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 ACVR1Q04771 509 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 THOC5Q13769 683 aaKnown RBP25.8■■□□□ 1.72
CPNE1-205ENST00000401607 PDE1CQ14123 709 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-205ENST00000401607 PDK4Q16654 411 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 FUT11Q495W5 492 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 RALGPS1Q5JS13 557 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 LY6G5CQ5SRR4 150 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 CPLX4Q7Z7G2 160 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 SRLQ86TD4 932 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 ZC3HC1Q86WB0 502 aaKnown RBP25.8■■□□□ 1.72
CPNE1-205ENST00000401607 SLC28A3Q9HAS3 691 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 PLLPQ9Y342 182 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 SPO11Q9Y5K1 396 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 ARL5AQ9Y689 179 aa25.8■■□□□ 1.72
CPNE1-205ENST00000401607 RFXAPO00287 272 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 TOP3BO95985 862 aaKnown RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 AHSGP02765 367 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 TYRP14679 529 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 SLC1A2P43004 574 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 CTSOP43234 321 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 CTBP1Q13363 440 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 NEPROQ6NW34 567 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 ADGRG2Q8IZP9 1017 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 C2CD4AQ8NCU7 369 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 ACVR1CQ8NER5 493 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 PTPRN2Q92932 1015 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 OTUB2Q96DC9 234 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 RSPRY1Q96DX4 576 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 FAM167BQ9BTA0 163 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 TM6SF2Q9BZW4 377 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 RHOJQ9H4E5 214 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 SNX15Q9NRS6 342 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 MYOFQ9NZM1 2061 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 ANKRD36A6QL64 1941 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 ZNF821O75541 412 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 RGS9BPQ6ZS82 235 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 CMC1Q7Z7K0 106 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 CELF5Q8N6W0 485 aaKnown RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 LPCAT1Q8NF37 534 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 PEX13Q92968 403 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 RMDN1Q96DB5 314 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 SMIM14Q96QK8 99 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 IQCGQ9H095 443 aaKnown RBP25.79■■□□□ 1.72
CPNE1-205ENST00000401607 MARK1Q9P0L2 795 aa25.79■■□□□ 1.72
CPNE1-205ENST00000401607 CXorf51AA0A1B0GTR3 108 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 CCL22O00626 93 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 WEE1P30291 646 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 SERPINB8P50452 374 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 AP1S1P61966 158 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 LAMB3Q13751 1172 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 GRM3Q14832 879 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 ZNF470Q6ECI4 717 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 SPOCK2Q92563 424 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 CDCA3Q99618 268 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-205ENST00000401607 GPR22Q99680 433 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 RIMKLBQ9ULI2 386 aa25.78■■□□□ 1.72
CPNE1-205ENST00000401607 SLC7A4O43246 635 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 BUD23O43709 281 aaKnown RBP25.77■■□□□ 1.72
CPNE1-205ENST00000401607 FZD6O60353 706 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 TYK2P29597 1187 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 SLC20A2Q08357 652 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 PTPRCAPQ14761 206 aa25.77■■□□□ 1.72
CPNE1-205ENST00000401607 UGP2Q16851 508 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms