RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 TBATAQ96M53 351 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 C11orf70Q9BRQ4 267 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 MAGEH1Q9H213 219 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 NOCTQ9UK39 431 aaKnown RBP12.06□□□□□ -0.48
LINC00544-201ENST00000400540 HPCAL4Q9UM19 191 aa12.06□□□□□ -0.48
LINC00544-201ENST00000400540 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 A0A1W2PQM1 296 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 C2CD4BA6NLJ0 364 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 D6RAR5 112 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 PES1O00541 588 aaKnown RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 BUB1O43683 1085 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 SLC28A2O43868 658 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 IGSF6O95976 241 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 PLEKP08567 350 aaPredicted RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 CHRNB2P17787 502 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 SDC4P31431 198 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 SLC5A2P31639 672 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 KLK7P49862 253 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 HK3P52790 923 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 HDAC4P56524 1084 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 CCL7P80098 99 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 FMO1Q01740 532 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 TGIF1Q15583 401 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 ARL13BQ3SXY8 428 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 RD3Q7Z3Z2 195 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 SFTPA2Q8IWL1 248 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 ARL10Q8N8L6 244 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 EXD3Q8N9H8 876 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 FAM172AQ8WUF8 416 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 CCNL2Q96S94 520 aaPredicted RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 TTYH3Q9C0H2 523 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
LINC00544-201ENST00000400540 DOLKQ9UPQ8 538 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 OR1A2Q9Y585 309 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
LINC00544-201ENST00000400540 PLD2O14939 933 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 NOBOXO60393 691 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 GFPT2O94808 682 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 PRKCGP05129 697 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 RPLP0P05388 317 aaKnown RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 MMP8P22894 467 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 UGT1A5P35504 534 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 PTPN9P43378 593 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 RHOAP61586 193 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 NFATC4Q14934 902 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 LRRC14Q15048 493 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 WSCD2Q2TBF2 565 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 LINC00303Q3SY05 128 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 TMEM52BQ4KMG9 183 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 ENPP7Q6UWV6 458 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 RAB11FIP2Q7L804 512 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 STRADAQ7RTN6 431 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 JAMLQ86YT9 394 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 FAM114A1Q8IWE2 563 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 FSTL5Q8N475 847 aaPredicted RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 FBXO39Q8N4B4 442 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 WDR48Q8TAF3 677 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 CENPIQ92674 756 aaPredicted RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 HMCESQ96FZ2 354 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 PDXPQ96GD0 296 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 GFM1Q96RP9 751 aaKnown RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 C1QTNF7Q9BXJ2 289 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 STK33Q9BYT3 514 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 CPEB1Q9BZB8 566 aaKnown RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 GANQ9H2C0 597 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 CLMPQ9H6B4 373 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 LHX3Q9UBR4 397 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
LINC00544-201ENST00000400540 GPR34Q9UPC5 381 aa12.04□□□□□ -0.48
LINC00544-201ENST00000400540 RELNP78509 3460 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 TOR1BO14657 336 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 PCCBP05166 539 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 CTSEP14091 401 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 ITIH1P19827 911 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
LINC00544-201ENST00000400540 INHBCP55103 352 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 NFKB2Q00653 900 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 CDR2Q01850 454 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 RAD51Q06609 339 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 NFATC3Q12968 1075 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 PTP4A2Q12974 167 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 INPP5AQ14642 412 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 ELOCQ15369 112 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 CYTH1Q15438 398 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 PRICKLE2Q7Z3G6 844 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 ZSWIM9Q86XI8 627 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 RTL3Q8N8U3 475 aaKnown RBP12.03□□□□□ -0.48
LINC00544-201ENST00000400540 PLA2G15Q8NCC3 412 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 APOOQ9BUR5 198 aa12.03□□□□□ -0.48
LINC00544-201ENST00000400540 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms