RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 SIRT3Q9NTG7 399 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 CHCHD3Q9NX63 227 aaKnown RBP5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 GULP1Q9UBP9 304 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 ZMAT5Q9UDW3 170 aaKnown RBP5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 SARDHQ9UL12 918 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 PCDHGA5Q9Y5G8 931 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 PCDHGA1Q9Y5H4 931 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 PCDHA5Q9Y5H7 936 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 KCNE2Q9Y6J6 123 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 X6R8D5 127 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 CUL9Q8IWT3 2517 aa5.51□□□□□ -1.53
HMGB3P7-201ENST00000400214 EYSQ5T1H1 3165 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PDCD11Q14690 1871 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 RNF103-CHMP3A0A140T963 221 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 LRRD1A4D1F6 860 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GRXCR1A8MXD5 290 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MYO1GB0I1T2 1018 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 M0QZ92 97 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 RAB27BO00194 218 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 RNF103O00237 685 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 DYRK3O43781 588 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 RRP9O43818 475 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 OPHN1O60890 802 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 COQ9O75208 318 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GJB5O95377 273 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 BMP15O95972 392 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 TUBBP07437 444 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GAAP10253 952 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GHRP10912 638 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 DRD2P14416 443 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PFKLP17858 780 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 TYMPP19971 482 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SAT1P21673 171 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 STIP1P31948 543 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ASPAP45381 313 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NRIP1P48552 1158 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CAMLGP49069 296 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 LMAN1P49257 510 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NPY4RP50391 375 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GALK1P51570 392 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 EPHA5P54756 1037 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NPEPPSP55786 919 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PTK6Q13882 451 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CTTNQ14247 550 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PCLAFQ15004 111 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 IL17AQ16552 155 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NTRK2Q16620 822 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GEN1Q17RS7 908 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 HFEQ30201 348 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 TTI2Q6NXR4 508 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 Q6ZVL8 140 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MARK2Q7KZI7 788 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ZNF410Q86VK4 478 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CATSPER3Q86XQ3 398 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 FAM129CQ86XR2 697 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 KRT73Q86Y46 540 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 IRF2BP1Q8IU81 584 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SFRP1Q8N474 314 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SLC15A4Q8N697 577 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ZNF655Q8N720 491 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 POC5Q8NA72 575 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MNS1Q8NEH6 495 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ERMNQ8TAM6 284 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SETD6Q8TBK2 473 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 KIAA1524Q8TCG1 905 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CPT1BQ92523 772 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 TOP1MTQ969P6 601 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MAP7D2Q96T17 732 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PKP4Q99569 1192 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ZPBPQ9BS86 351 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NAA11Q9BSU3 229 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 RAB34Q9BZG1 259 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ACPTQ9BZG2 426 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 INTS2Q9H0H0 1204 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 FAM49AQ9H0Q0 323 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 NCOR1P1Q9H4R4 102 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 GSX1Q9H4S2 264 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ZSCAN16Q9H4T2 348 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 AGO3Q9H9G7 860 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MRPL44Q9H9J2 332 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SEMA4BQ9NPR2 832 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 SLAMF7Q9NQ25 335 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ARHGEF3Q9NR81 526 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 FAM105AQ9NUU6 356 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 DDX18Q9NVP1 670 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 POLR3BQ9NW08 1133 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MTMR10Q9NXD2 777 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 LIMA1Q9UHB6 759 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 DBR1Q9UK59 544 aaKnown RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 KCNH3Q9ULD8 1083 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 PADI3Q9ULW8 664 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 CA14Q9ULX7 337 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 MTMR6Q9Y217 621 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 LIPT1Q9Y234 373 aa5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 COA3Q9Y2R0 106 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P7-201ENST00000400214 ASB1Q9Y576 335 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms