RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ABCC13Q9NSE7 274 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 CLEC4AQ9UMR7 237 aa11.7□□□□□ -0.54
HLCS-202ENST00000399120 PDE2AO00408 941 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 TFECO14948 347 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 ATP4AP20648 1035 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 MBTD1Q05BQ5 628 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 ATP13A4Q4VNC1 1196 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TMPRSS11AQ6ZMR5 421 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 C4orf19Q8IY42 314 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TSEN15Q8WW01 171 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 POP5Q969H6 163 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 MBOAT7Q96N66 472 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 PRDM16Q9HAZ2 1276 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ETNK2Q9NVF9 386 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 MFHAS1Q9Y4C4 1052 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ZMYM2Q9UBW7 1377 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 OR14I1A6ND48 311 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 H0Y858 1186 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 DCLK1O15075 740 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 FGF10O15520 208 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 USP12O75317 370 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TTPAP49638 278 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CLCN5P51795 746 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CBX3Q13185 183 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 PANX1Q96RD7 426 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TRIM2Q9C040 744 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CHMP1AQ9HD42 196 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 GGA2Q9UJY4 613 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 IKZF2Q9UKS7 526 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 DNPEPQ9ULA0 475 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 FAM172BPA6NC97 362 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 LRIG2O94898 1065 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 HMGCRP04035 888 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CSF1RP07333 972 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 THRBP10828 461 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 KCNA5P22460 613 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ADRA1DP25100 572 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 IFI35P80217 286 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 PABPC1LQ4VXU2 614 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 MPPE1Q53F39 396 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TCEAL6Q6IPX3 200 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 RTL4Q6ZR62 310 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 BEND5Q7L4P6 421 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ARMCX6Q7L4S7 300 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 SNX20Q7Z614 316 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ZCCHC9Q8N567 271 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 FBXO6Q9NRD1 293 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 AASDHPPTQ9NRN7 309 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 PNPLA3Q9NST1 481 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CDH5P33151 784 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 TBX2Q13207 712 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 BMT2Q1RMZ1 405 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 SLC34A3Q8N130 599 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ZNF615Q8N8J6 731 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
HLCS-202ENST00000399120 DKK3Q9UBP4 350 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 HTR1BP28222 390 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 RBL1P28749 1068 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 CD86P42081 329 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ANTXR2P58335 489 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ERICH5Q6P6B1 374 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 SLC27A1Q6PCB7 646 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 GPRIN3Q6ZVF9 776 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 HPS1Q92902 700 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 C11orf24Q96F05 449 aaPredicted RBP11.69□□□□□ -0.54
HLCS-202ENST00000399120 FCRL4Q96PJ5 515 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 BAIAP2Q9UQB8 552 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 SLC27A6Q9Y2P4 619 aa11.69□□□□□ -0.54
HLCS-202ENST00000399120 TRAV19A0A0A6YYK7 116 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 G3V2T6 193 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 H3BRB1 525 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 XKRYO14609 159 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 SUV39H1O43463 412 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 CHST10O43529 356 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 SERPINA3P01011 423 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 BDNFP23560 247 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 AXLP30530 894 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 SLC25A3Q00325 362 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 C4orf46Q504U0 113 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 TNFAIP8L3Q5GJ75 292 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 FAM91A1Q658Y4 838 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 GPR180Q86V85 440 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 PIK3R3Q92569 461 aa11.68□□□□□ -0.54
HLCS-202ENST00000399120 ACE2Q9BYF1 805 aaPredicted RBP11.68□□□□□ -0.54
HLCS-202ENST00000399120 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms