RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MGME1Q9BQP7 344 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MAK16Q9BXY0 300 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NT5MQ9NPB1 228 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 UPK3BL1B0FP48 263 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 UPK3BL2E5RIL1 263 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 APOL1O14791 398 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MATN3O15232 486 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PJA2O43164 708 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PSTPIP1O43586 416 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SH3BP5O60239 455 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 XPAP23025 273 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CCNCP24863 283 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 AKT2P31751 481 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CDKN2BP42772 138 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NOVA1P51513 510 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 AP1S1P61966 158 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ADCY2Q08462 1091 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 BRAT1Q6PJG6 821 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 B4GALNT4Q76KP1 1039 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PIP4P1Q86T03 277 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 VSIG1Q86XK7 387 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TEX26Q8N6G2 289 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HCAR2Q8TDS4 363 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TMEM131Q92545 1883 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SKA1Q96BD8 255 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ECHDC3Q96DC8 303 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TSGA13Q96PP4 275 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NUDCD1Q96RS6 583 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 C1QTNF2Q9BXJ5 285 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PCDH12Q9NPG4 1184 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SAE1Q9UBE0 346 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CABIN1Q9Y6J0 2220 aa14.21□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NCOR2Q9Y618 2525 aa14.21□□□□□ -0.14
HLA-DQB1-202ENST00000399079 POM121BA6NF01 834 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 KCNK1O00180 336 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CCNB1P14635 433 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 MX2P20592 715 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 HSPA9P38646 679 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 NXPH1P58417 271 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ITKQ08881 620 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SGCGQ13326 291 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SLC14A1Q13336 389 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ZNF423Q2M1K9 1284 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SLC45A4Q5BKX6 768 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 KAZNQ674X7 775 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SPOCD1Q6ZMY3 1216 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GCNT7Q6ZNI0 430 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 BBS5Q8N3I7 341 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PAF1Q8N7H5 531 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 OR13H1Q8NG92 308 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 PDCD6IPQ8WUM4 868 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 MAML1Q92585 1016 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 HDAC11Q96DB2 347 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 BMFQ96LC9 184 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ELF4Q99607 663 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 KLF6Q99612 283 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CAAP1Q9H8G2 361 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GDF3Q9NR23 364 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RBM22Q9NW64 420 aaKnown RBP eCLIP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TTLL3Q9Y4R7 772 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 MACROD2A1Z1Q3 448 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 BTNL10A8MVZ5 291 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 A8MX80 341 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 RIOK3O14730 519 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ZRANB2O95218 330 aaKnown RBP eCLIP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 THEGLP0DJG4 465 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CSRP1P21291 193 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 FAM193AP78312 1265 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TRAF2Q12933 501 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 IHHQ14623 411 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TAZQ16635 292 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TIGD7Q6NT04 549 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 IQCHQ86VS3 1027 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CCDC13Q8IYE1 715 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 KATNAL2Q8IYT4 538 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CXorf40AQ8TE69 158 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 SEMA3CQ99985 751 aa14.2□□□□□ -0.14
HLA-DQB1-202ENST00000399079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CST8O60676 142 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 TM7SF2O76062 418 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 JCHAINP01591 159 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 HLA-DQB2P05538 268 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 ZNF883P0CG24 379 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 CEACAM1P13688 526 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 MMP12P39900 470 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 GSDMDP57764 484 aa14.19□□□□□ -0.14
HLA-DQB1-202ENST00000399079 DSC2Q02487 901 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms