RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KRT222Q8N1A0 295 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 FBF1Q8TES7 1133 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 CFAP36Q96G28 342 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 PLA2G2FQ9BZM2 168 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 CIPCQ9C0C6 399 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 TMBIM4Q9HC24 238 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 SENP1Q9P0U3 644 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 PSMC3IPQ9P2W1 217 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 LGALS13Q9UHV8 139 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 ZNF180Q9UJW8 692 aa19.18■□□□□ 0.66
TSPAN4-204ENST00000397404 GRXCR2A6NFK2 248 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 H3BQ06 376 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 SMAD6O43541 496 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 ZNF821O75541 412 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 TNFRSF4P43489 277 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 FAM193AP78312 1265 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 GRM2Q14416 872 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 SKIDA1Q1XH10 827 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 ACCSLQ4AC99 568 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 CERCAMQ5T4B2 595 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 IGDCC3Q8IVU1 814 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 AGGF1Q8N302 714 aaeCLIP19.17■□□□□ 0.661e-7■■■■□ 23.7
TSPAN4-204ENST00000397404 PHTF2Q8N3S3 785 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 CALML6Q8TD86 181 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 RMDN1Q96DB5 314 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 MRGPRX3Q96LB0 322 aa19.17■□□□□ 0.66
TSPAN4-204ENST00000397404 EDDM13A0A1B0GTR0 161 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 TBC1D3BA6NDS4 549 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 FAM159BA6NKW6 160 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 C2orf81A6NN90 581 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 RGS16O15492 202 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 BANF1O75531 89 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 PGLSO95336 258 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 OPRD1P41143 372 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MSH2P43246 934 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SERPINB9P50453 376 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MGAT5Q09328 741 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SKIV2LQ15477 1246 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 LONRF1Q17RB8 773 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 DGKKQ5KSL6 1271 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 TMEM215Q68D42 235 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 KIAA0930Q6ICG6 404 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 BRAT1Q6PJG6 821 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 C12orf40Q86WS4 652 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 RALGPS2Q86X27 583 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MPP5Q8N3R9 675 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 FRS2Q8WU20 508 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 EXOC2Q96KP1 924 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 RPL10LQ96L21 214 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 ATP6V1G3Q96LB4 118 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 FAM161BQ96MY7 647 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 APOL2Q9BQE5 337 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MAGEE1Q9HCI5 957 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SUN2Q9UH99 717 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 PHTF1Q9UMS5 762 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 ACTL7BQ9Y614 415 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 ACTL7AQ9Y615 435 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MROH6A6NGR9 719 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 K7ERQ8 282 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 TRAFD1O14545 582 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 KAT7O95251 611 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SYF2O95926 243 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SHBGP04278 402 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 INHBAP08476 426 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 PSMA3P25788 255 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 CTSOP43234 321 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 EPHB1P54762 984 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 TAF1AQ15573 450 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 HP1BP3Q5SSJ5 553 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 ADGRD1Q6QNK2 874 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SLC26A11Q86WA9 606 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 STYXQ8WUJ0 223 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 SLC44A1Q8WWI5 657 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MYLIPQ8WY64 445 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MTBPQ96DY7 904 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 CERS2Q96G23 380 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 MYO19Q96H55 970 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 LYSMD1Q96S90 227 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 HEPHQ9BQS7 1158 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 DHRS4Q9BTZ2 278 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 TM6SF2Q9BZW4 377 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 GTSE1Q9NYZ3 720 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 PPIL1Q9Y3C6 166 aa19.16■□□□□ 0.66
TSPAN4-204ENST00000397404 IQANK1A0A1B0GTG1 560 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 OTOL1A6NHN0 477 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 HNRNPLP14866 589 aaKnown RBP eCLIP19.15■□□□□ 0.665e-7■□□□□ 11.2
TSPAN4-204ENST00000397404 STK19P49842 368 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 SUOXP51687 545 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 CCNHP51946 323 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 TRAF2Q12933 501 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 DNAJC3Q13217 504 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 MSLNQ13421 630 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 POU6F1Q14863 301 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 PTPRNQ16849 979 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 UGP2Q16851 508 aa19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 HNRNPA1L2Q32P51 320 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 MARK2Q7KZI7 788 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-204ENST00000397404 DSG4Q86SJ6 1040 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms