RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 PSMB7Q99436 277 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 DHX35Q9H5Z1 703 aaKnown RBP13.9□□□□□ -0.18
SEC13-205ENST00000397101 PREBQ9HCU5 417 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 GPATCH2LQ9NWQ4 482 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 NLGN3Q9NZ94 848 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 BOD1L1Q8NFC6 3051 aa13.9□□□□□ -0.18
SEC13-205ENST00000397101 A0A1B0GVM2 712 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 NEMP2A6NFY4 417 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 CSO75390 466 aaKnown RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 RARAP10276 462 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 CTNNA1P35221 906 aaKnown RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 ADRA1BP35368 520 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 CSRP3P50461 194 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 PLK1P53350 603 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 OXCT1P55809 520 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 ATP13A4Q4VNC1 1196 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 SEL1L2Q5TEA6 688 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 LRRC38Q5VT99 294 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 MAP7D3Q8IWC1 876 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 KIF18AQ8NI77 898 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 OR8D1Q8WZ84 308 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 KRT35Q92764 455 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 RNF25Q96BH1 459 aaPredicted RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 MYEOVQ96EZ4 313 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 HES6Q96HZ4 224 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 RPL10LQ96L21 214 aaKnown RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 SNRNP25Q9BV90 132 aaKnown RBP13.89□□□□□ -0.19
SEC13-205ENST00000397101 SIK2Q9H0K1 926 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 PPM1HQ9ULR3 514 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 FZD10Q9ULW2 581 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 AP4E1Q9UPM8 1137 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 PCDHA3Q9Y5H8 950 aa13.89□□□□□ -0.19
SEC13-205ENST00000397101 LRRD1A4D1F6 860 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 C1QTNF3-AMACRE9PGA6 284 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 DAPK3O43293 454 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 SLC28A2O43868 658 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 CREB3O43889 395 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 PIAS2O75928 621 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 URI1O94763 535 aaPredicted RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 ZRANB2O95218 330 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEC13-205ENST00000397101 IGLV3-25P01717 112 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 THEGLP0DJG4 465 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 IL1R2P27930 398 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 MAT2AP31153 395 aaKnown RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 AIF1P55008 147 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 CDH6P55285 790 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 ISXQ2M1V0 245 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 PPP6R3Q5H9R7 873 aaPredicted RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 TXNRD3NBQ6F5E7 133 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 RCOR2Q8IZ40 523 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 APCDD1Q8J025 514 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 TEKT4Q8WW24 435 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 RBM41Q96IZ5 413 aaKnown RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 APOLD1Q96LR9 279 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 SLC46A1Q96NT5 459 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 CALN1Q9BXU9 219 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 MAK16Q9BXY0 300 aaKnown RBP13.88□□□□□ -0.19
SEC13-205ENST00000397101 TMPRSS4Q9NRS4 437 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEC13-205ENST00000397101 HECTD1Q9ULT8 2610 aa13.88□□□□□ -0.19
SEC13-205ENST00000397101 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 MCF2LO15068 1137 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 SCAMP1O15126 338 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 ATP9BO43861 1147 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 CEP104O60308 925 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 PAGE1O75459 146 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 RBMS1P29558 406 aaKnown RBP13.87□□□□□ -0.19
SEC13-205ENST00000397101 CXCR5P32302 372 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 ARL4AP40617 200 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 MARCKSL1P49006 195 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 CCDC15Q0P6D6 951 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 CNTN1Q12860 1018 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 MTA1Q13330 715 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
SEC13-205ENST00000397101 BNIPLQ7Z465 357 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
SEC13-205ENST00000397101 KATNAL2Q8IYT4 538 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 PBKQ96KB5 322 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 BTN2A3PQ96KV6 586 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 ABCG4Q9H172 646 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 UCKL1Q9NWZ5 548 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 ARHGEF38Q9NXL2 777 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 NCKIPSDQ9NZQ3 722 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 SARDHQ9UL12 918 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 SAR1BQ9Y6B6 198 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 U3KQA8 63 aa13.87□□□□□ -0.19
SEC13-205ENST00000397101 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
SEC13-205ENST00000397101 CDRT15L2A8MXV6 281 aa13.86□□□□□ -0.19
SEC13-205ENST00000397101 KCNU1A8MYU2 1149 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms