RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 AGBL2Q5U5Z8 902 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 HCAR2Q8TDS4 363 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 HLA-CQ95604 372 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 VOPP1Q96AW1 172 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 EXOC2Q96KP1 924 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 ZNF641Q96N77 438 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-209ENST00000397036 ATP13A3Q9H7F0 1226 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 BRD9Q9H8M2 597 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 HACD3Q9P035 362 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 LGALS13Q9UHV8 139 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 PLA2G4CQ9UP65 541 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 PPIL1Q9Y3C6 166 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 STARD13Q9Y3M8 1113 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 RPS6KL1Q9Y6S9 549 aa13.72□□□□□ -0.21
MCF2L-209ENST00000397036 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 EXOC1LA0A1B0GW35 172 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 MROH6A6NGR9 719 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 NPC1O15118 1278 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 GJB3O75712 270 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 PGLSO95336 258 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 NUMBP49757 651 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 CRADDP78560 199 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 BCL2L1Q07817 233 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 TRAF2Q12933 501 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 KRT71Q3SY84 523 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 ARMC12Q5T9G4 340 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 PPHLN1Q8NEY8 458 aaKnown RBP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 UHMK1Q8TAS1 419 aaKnown RBP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 ECHDC3Q96DC8 303 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 CFAP36Q96G28 342 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 GUCD1Q96NT3 240 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 TM6SF2Q9BZW4 377 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 STMN4Q9H169 189 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 TRABDQ9H4I3 376 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 CHRAC1Q9NRG0 131 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 TREX1Q9NSU2 369 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 PIH1D1Q9NWS0 290 aaKnown RBP13.71□□□□□ -0.21
MCF2L-209ENST00000397036 OGFRQ9NZT2 677 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 CHKBQ9Y259 395 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 PCDHGC4Q9Y5F7 938 aa13.71□□□□□ -0.21
MCF2L-209ENST00000397036 F5P12259 2224 aa13.71□□□□□ -0.22
MCF2L-209ENST00000397036 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-209ENST00000397036 C2CD4DB7Z1M9 353 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 PRRT4C9JH25 899 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 GLULP15104 373 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 FOSL2P15408 326 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 SERPINA4P29622 427 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 TNFRSF4P43489 277 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 RECQLP46063 649 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-209ENST00000397036 GRIA4P48058 902 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 ST8SIA6P61647 398 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 FAM193AP78312 1265 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 ACVR1Q04771 509 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 MGAT5Q09328 741 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 ADGRD1Q6QNK2 874 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 SLC25A41Q8N5S1 370 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 OR2A12Q8NGT7 310 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 PIH1D2Q8WWB5 315 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 SLC44A1Q8WWI5 657 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 CDKL2Q92772 493 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 CHFRQ96EP1 664 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 FCRL3Q96P31 734 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-209ENST00000397036 CIPCQ9C0C6 399 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 C8orf33Q9H7E9 229 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-209ENST00000397036 MAGEE1Q9HCI5 957 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-209ENST00000397036 ZNF180Q9UJW8 692 aa13.7□□□□□ -0.22
MCF2L-209ENST00000397036 TBC1D3BA6NDS4 549 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KAT7O95251 611 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 APODP05090 189 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PDHA1P08559 390 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 HNRNPLP14866 589 aaKnown RBP eCLIP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PAMP19021 973 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 GCAP28676 217 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 CCNHP51946 323 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 PDE1BQ01064 536 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ENPP2Q13822 863 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 POU6F1Q14863 301 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 QPCTQ16769 361 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KBTBD12Q3ZCT8 623 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KIAA0930Q6ICG6 404 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-209ENST00000397036 DPY19L3Q6ZPD9 716 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KDELC2Q7Z4H8 507 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KRT222Q8N1A0 295 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 SLC44A3Q8N4M1 653 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 KCNV2Q8TDN2 545 aa13.69□□□□□ -0.22
MCF2L-209ENST00000397036 STYXQ8WUJ0 223 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms