RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SCRN2Q96FV2 425 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 C16orf45Q96MC5 204 aaPredicted RBP10.69□□□□□ -0.7
NUP98-205ENST00000397007 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 NAP1L3Q99457 506 aaPredicted RBP10.69□□□□□ -0.7
NUP98-205ENST00000397007 PHACTR1Q9C0D0 580 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 PREBQ9HCU5 417 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 ZSCAN32Q9NX65 697 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 RIMKLBQ9ULI2 386 aa10.69□□□□□ -0.7
NUP98-205ENST00000397007 A0A0J9YYE9 177 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 C16orf96A6NNT2 1141 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 TRBC1P01850 177 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 GRIA4P48058 902 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 PMS2CLQ68D20 193 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 TMPRSS6Q8IU80 811 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 FRMD1Q8N878 549 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 FLCNQ8NFG4 579 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 CENPTQ96BT3 561 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 CINPQ9BW66 212 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 SGK2Q9HBY8 427 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 EVLQ9UI08 416 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 E7ESA3 106 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 PSMD11O00231 422 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 JCHAINP01591 159 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 CASQ1P31415 396 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 MAXP61244 160 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 AP1B1Q10567 949 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 QPCTQ16769 361 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 ZNF658BQ4V348 819 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 TMC3Q7Z5M5 1100 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 PRUNE1Q86TP1 453 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 FAM71DQ8N9W8 422 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 TP53I13Q8NBR0 393 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 LRRN4CLQ8ND94 238 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 MCUQ8NE86 351 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 SPATA22Q8NHS9 363 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 CPT1BQ92523 772 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 SEMA3CQ99985 751 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 MCMBPQ9BTE3 642 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 C1QTNF2Q9BXJ5 285 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 NEUROG2Q9H2A3 272 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 GGT7Q9UJ14 662 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 RHOAP61586 193 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 GUCY2DQ02846 1103 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 DHX34Q14147 1143 aaKnown RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 LLGL1Q15334 1064 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 HIBCHQ6NVY1 386 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 CCDC137Q6PK04 289 aaKnown RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 CYP2U1Q7Z449 544 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 CAND1Q86VP6 1230 aaKnown RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 PPP1R2P1Q96PQ5 205 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 SPON2Q9BUD6 331 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 AP1M1Q9BXS5 423 aa10.68□□□□□ -0.7
NUP98-205ENST00000397007 POLMQ9NP87 494 aaPredicted RBP10.68□□□□□ -0.7
NUP98-205ENST00000397007 DMXL1Q9Y485 3027 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 TCRBV7S3A2A0A539 114 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 ERI2A8K979 691 aaKnown RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 ZNF217O75362 1048 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 MT-CYBP00156 380 aaPredicted RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 BCKDHBP21953 392 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 PSMB4P28070 264 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 DCDC1P59894 354 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 PTSQ03393 145 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 SLC1A5Q15758 541 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 HEATR6Q6AI08 1181 aaKnown RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 CAMK1DQ8IU85 385 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 CCDC110Q8TBZ0 833 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 RUNDC3BQ96NL0 473 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 PRRX2Q99811 253 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 MAGEE1Q9HCI5 957 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 NT5MQ9NPB1 228 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 ZDHHC18Q9NUE0 388 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 A0A1W2PR77 199 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 H7C0S8 307 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 KCNN4O15554 427 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 ZSCAN5DPP0CG00 497 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 OXTRP30559 389 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 UGP2Q16851 508 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 ZDHHC24Q6UX98 284 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 KBTBD6Q86V97 674 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 SCARF2Q96GP6 870 aaPredicted RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 FUT8Q9BYC5 575 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 FEZ2Q9UHY8 353 aaPredicted RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 TPX2Q9ULW0 747 aaKnown RBP10.67□□□□□ -0.7
NUP98-205ENST00000397007 PHTF1Q9UMS5 762 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 SLCO1B1Q9Y6L6 691 aa10.67□□□□□ -0.7
NUP98-205ENST00000397007 ESPNB1AK53 854 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 TMEM63AO94886 807 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 HOXC4P09017 264 aaPredicted RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 SLC8A1P32418 973 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 DEKP35659 375 aaKnown RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 KCNJ1P48048 391 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 DPTQ07507 201 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 FRG1Q14331 258 aaKnown RBP10.66□□□□□ -0.7
NUP98-205ENST00000397007 SIRPB2Q5JXA9 342 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 EXOC2Q96KP1 924 aa10.66□□□□□ -0.7
NUP98-205ENST00000397007 RBM15Q96T37 977 aaKnown RBP eCLIP10.66□□□□□ -0.75e-7■■□□□ 12.8
NUP98-205ENST00000397007 CEP41Q9BYV8 373 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms