RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CBX4O00257 560 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 CCL22O00626 93 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 CSRP3P50461 194 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PRAMEP78395 509 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ALG1LQ6GMV1 187 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 SETD3Q86TU7 594 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ALYREFQ86V81 257 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 TTC16Q8NEE8 873 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 OR6P1Q8NGX9 317 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ARHGEF3Q9NR81 526 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 MID2Q9UJV3 735 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PCDHB12Q9Y5F1 795 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 BPTFQ12830 3046 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 MROH6A6NGR9 719 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ZBBXA8MT70 800 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 DNAJC6O75061 913 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 APOA4P06727 396 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 POLD2P49005 469 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PTAR1Q7Z6K3 402 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PSKH2Q96QS6 385 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 SLC22A12Q96S37 553 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ANAPC1Q9H1A4 1944 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■□□ 18.7
ITGB1-202ENST00000396033 G3V2L1 256 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 AURKAO14965 403 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 GLRBP48167 497 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ABCE1P61221 599 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 FBXO46Q6PJ61 603 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 CNSTQ6PJW8 725 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 CEP97Q8IW35 865 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 WDR75Q8IWA0 830 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PIWIL2Q8TC59 973 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 PRR11Q96HE9 360 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ZFRQ96KR1 1074 aaKnown RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ACE2Q9BYF1 805 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-202ENST00000396033 SAR1AQ9NR31 198 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 ACOT9Q9Y305 439 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 KCTD3Q9Y597 815 aa12.23□□□□□ -0.45
ITGB1-202ENST00000396033 TK2O00142 265 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 FGF18O76093 207 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 BAIAP3O94812 1187 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 F11P03951 625 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 T-ENOLP0DO92 83 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CRABP2P29373 138 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 SCNN1BP51168 640 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CTC1Q2NKJ3 1217 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 TXNDC8Q6A555 127 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RNF135Q8IUD6 432 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 HDAC10Q969S8 669 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 LRMDAQ9H2I8 198 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RUVBL2Q9Y230 463 aaKnown RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 STK38LQ9Y2H1 464 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 ARL5AQ9Y689 179 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 KIAA1671Q9BY89 1806 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 FCHO1O14526 889 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 SLC7A4O43246 635 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 LDB2O43679 373 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 TBL1XO60907 577 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 C1RP00736 705 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 EPOP01588 193 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 KRT16P08779 473 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 PIRTP0C851 137 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RGRP47804 291 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 ARSDP51689 593 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 TAS2R39P59534 338 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CREMQ03060 361 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 BIRC2Q13490 618 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RFTN1Q14699 578 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CXorf57Q6NSI4 855 aaKnown RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 TTC7BQ86TV6 843 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CENPLQ8N0S6 344 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 NDNQ99608 321 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 NMUR2Q9GZQ4 415 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 ZBP1Q9H171 429 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CPQQ9Y646 472 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RASSF2P50749 326 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 POU4F1Q01851 419 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 HSF5Q4G112 596 aaPredicted RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RBM20Q5T481 1227 aaKnown RBP12.22□□□□□ -0.45
ITGB1-202ENST00000396033 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 RILPQ96NA2 401 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 SORT1Q99523 831 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 SIKE1Q9BRV8 207 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms