RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CERS5Q8N5B7 392 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 FAM47BQ8NA70 645 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 POC5Q8NA72 575 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 LHX5Q9H2C1 402 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 KPNA3O00505 521 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 NRP2O60462 931 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 IDO1P14902 403 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CRHR1P34998 444 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CSNK2BP67870 215 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 UGCGQ16739 394 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 AFTPHQ6ULP2 937 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 OSBPL7Q9BZF2 842 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 CRNNQ9UBG3 495 aaPredicted RBP13.21□□□□□ -0.29
LCA5-202ENST00000392959 TBC1D30Q9Y2I9 924 aa13.21□□□□□ -0.29
LCA5-202ENST00000392959 NRCAMQ92823 1304 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 AGPSO00116 658 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 SLURP2P0DP57 97 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 ACOX1Q15067 660 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 INSCQ1MX18 579 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 RFX4Q33E94 735 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 CATSPERGQ6ZRH7 1159 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 USP45Q70EL2 814 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 EIF3MQ7L2H7 374 aaKnown RBP13.21□□□□□ -0.3
LCA5-202ENST00000392959 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.3
LCA5-202ENST00000392959 ZBTB46Q86UZ6 589 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 HDAC10Q969S8 669 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 REXO5Q96IC2 774 aaKnown RBP13.21□□□□□ -0.3
LCA5-202ENST00000392959 QRFPRQ96P65 431 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 VPS35Q96QK1 796 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 CAB39LQ9H9S4 337 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 S100A14Q9HCY8 104 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 TRAF6Q9Y4K3 522 aa13.21□□□□□ -0.3
LCA5-202ENST00000392959 CAPN8A6NHC0 703 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 RPN2P04844 631 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 HOXC6P09630 235 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 MRPS5P82675 430 aaKnown RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 GPR180Q86V85 440 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 IKZF3Q9UKT9 509 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 COG5Q9UP83 839 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 DNM1LO00429 736 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 B4GALT5O43286 388 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 OTCP00480 354 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 PIRTP0C851 137 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 NELFEP18615 380 aaKnown RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 FSCN1Q16658 493 aaKnown RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 TIGD2Q4W5G0 525 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 HIPK1Q86Z02 1210 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 LRRC52Q8N7C0 313 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ANKRD49Q8WVL7 239 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 C7orf26Q96N11 449 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 NPAS2Q99743 824 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 TRIM8Q9BZR9 551 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 SLC12A4Q9UP95 1085 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 IPPQ9Y573 584 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ATRNO75882 1429 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 WNT3AP56704 352 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 MAXP61244 160 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 PTSQ03393 145 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 TXNDC11Q6PKC3 985 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 PLPPR4Q7Z2D5 763 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 HPS6Q86YV9 775 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ATL1Q8WXF7 558 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 CPT1BQ92523 772 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 GNPTGQ9UJJ9 305 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 LRRIQ1Q96JM4 1722 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ANKDD1BA6NHY2 528 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 TGDSO95455 350 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 ABL2P42684 1182 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 GATAD2AQ86YP4 633 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 DEPDC4Q8N2C3 294 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 MRPL39Q9NYK5 338 aaKnown RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
LCA5-202ENST00000392959 DMTF1Q9Y222 760 aa13.2□□□□□ -0.3
LCA5-202ENST00000392959 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 TULP2O00295 520 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 ZSWIM7Q19AV6 140 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 METTL21CQ5VZV1 264 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 POP5Q969H6 163 aaKnown RBP13.19□□□□□ -0.3
LCA5-202ENST00000392959 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 CCDC28BQ9BUN5 200 aa13.19□□□□□ -0.3
LCA5-202ENST00000392959 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms