RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 EPB41L1Q9H4G0 881 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 POMKQ9H5K3 350 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 PREBQ9HCU5 417 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 TRPC7Q9HCX4 862 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 ACOT9Q9Y305 439 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 FAM95CA0A1B0GW59 222 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 PMPCBO75439 489 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 HMBSP08397 361 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 FAM58BPP0C7Q3 252 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 TSPAN8P19075 237 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 SLC1A2P43004 574 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 GPR15P49685 360 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 TAS2R39P59534 338 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 C1QTNF8P60827 252 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 RPL26P61254 145 aaKnown RBP16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 GALNT2Q10471 571 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 CDH17Q12864 832 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 DRAXINQ8NBI3 349 aaPredicted RBP16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 HDAC11Q96DB2 347 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 CHST12Q9NRB3 414 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 PTTG2Q9NZH5 202 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 CCDC167Q9P0B6 97 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 RNF11Q9Y3C5 154 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 RALGAPA2Q2PPJ7 1873 aa16.4■□□□□ 0.22
NKX3-1-201ENST00000380871 SOAT2O75908 522 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF26P17031 533 aaPredicted RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 OR1G1P47890 313 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 NPY2RP49146 381 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 PDAP1Q13442 181 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 PCSK7Q16549 785 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 DDR2Q16832 855 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 MGAT5BQ3V5L5 792 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 B3GNT6Q6ZMB0 384 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 OR9I1Q8NGQ6 314 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 HEXDCQ8WVB3 486 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 TMIGD2Q96BF3 282 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ELMO2Q96JJ3 720 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 COQ10BQ9H8M1 238 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 LIN28AQ9H9Z2 209 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 VPS28Q9UK41 221 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 RBM20Q5T481 1227 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 TRIM67Q6ZTA4 783 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 TFAP2DQ7Z6R9 452 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF280BQ86YH2 543 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 SPATA2LQ8IUW3 424 aaPredicted RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 AHI1Q8N157 1196 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 TMEM86AQ8N2M4 240 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 MRPS26Q9BYN8 205 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF696Q9H7X3 374 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 ATXN10Q9UBB4 475 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 MYLKQ15746 1914 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 TADA2AO75478 443 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 APOA4P06727 396 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC5A2P31639 672 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 RAB10P61026 200 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 PSME3P61289 254 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 APOFQ13790 326 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC39A12Q504Y0 691 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 MTX3Q5HYI7 312 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 SERINC5Q86VE9 423 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 MYO1HQ8N1T3 1032 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 FAM81AQ8TBF8 368 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 RDH11Q8TC12 318 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 KIFC1Q9BW19 673 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
NKX3-1-201ENST00000380871 PRORSD1PA6NEY8 169 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 FBP2O00757 339 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 STMN1P16949 149 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 SULT2A1Q06520 285 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ITKQ08881 620 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 SEPT6Q14141 434 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 CSHL1Q14406 222 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 TBC1D25Q3MII6 688 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ZNF470Q6ECI4 717 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 SLC29A1Q99808 456 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 FICDQ9BVA6 458 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ANKRD6Q9Y2G4 727 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 GIT1Q9Y2X7 761 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ATP6AP2A0A1C7CYW4 349 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 TTC24A2A3L6 582 aaPredicted RBP16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ATP6AP2O75787 350 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 LPIN1Q14693 890 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 INTS6LQ5JSJ4 861 aaKnown RBP16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 ITPRIPL1Q6GPH6 555 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 CIB1Q99828 191 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 MID2Q9UJV3 735 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 SNX13Q9Y5W8 968 aa16.38■□□□□ 0.21
NKX3-1-201ENST00000380871 MAGEB16A2A368 324 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 PLOD2O00469 737 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 B4GALT3O60512 393 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 GRK4P32298 578 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 CAP1Q01518 475 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 TSPY1Q01534 308 aa16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 FRG1Q14331 258 aaKnown RBP16.37■□□□□ 0.21
NKX3-1-201ENST00000380871 NAPEPLDQ6IQ20 393 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms