RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 COPG2Q9UBF2 871 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 OR10H1Q9Y4A9 318 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
HIF3A-205ENST00000377670 ALAS2P22557 587 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 CRADDP78560 199 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 AGKQ53H12 422 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 OLFML1Q6UWY5 402 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF483Q8TF39 744 aaPredicted RBP10.89□□□□□ -0.67
HIF3A-205ENST00000377670 SHC3Q92529 594 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 SEPHS2Q99611 448 aa10.89□□□□□ -0.67
HIF3A-205ENST00000377670 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
HIF3A-205ENST00000377670 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
HIF3A-205ENST00000377670 AHCYL1O43865 530 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 FAM20BO75063 409 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 KRT6AP02538 564 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 KRT6BP04259 564 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ALOX12P18054 663 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 KRT6CP48668 564 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RPS7P62081 194 aaKnown RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ITGADQ13349 1161 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TMEM139Q8IV31 216 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TOP6BLQ8N6T0 577 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TRIM63Q969Q1 353 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 KIAA1143Q96AT1 154 aaPredicted RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 NKX2-4Q9H2Z4 354 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 SLC32A1Q9H598 525 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RBPJLQ9UBG7 517 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 SPATA2Q9UM82 520 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 MRPS33Q9Y291 106 aaKnown RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF682O95780 498 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 FASP25445 335 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 DMWDQ09019 674 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 OTUD3Q5T2D3 398 aaPredicted RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CRTC3Q6UUV7 619 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 VSTM1Q6UX27 236 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 COMMD2Q86X83 199 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 WNT8BQ93098 351 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 IMP3Q9NV31 184 aaKnown RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 C5P01031 1676 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 A0A1W2PQ45 241 aaPredicted RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 A0A1W2PQY0 241 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CHURC1-FNTBB4DL54 471 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 H3BMM5 538 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TAF4O00268 1085 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 KPNA5O15131 536 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 FTH1P02794 183 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF24P17028 368 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 POU1F1P28069 291 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RBL1P28749 1068 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 PRKCIP41743 596 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ARRB1P49407 418 aaPredicted RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TAF10Q12962 218 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RIPOR1Q6ZS17 1223 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 MON1AQ86VX9 555 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 STK40Q8N2I9 435 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ACOX2Q99424 681 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TBCBQ99426 244 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CEP44Q9C0F1 390 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TXNRD2Q9NNW7 524 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 SALL4Q9UJQ4 1053 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CCNDBP1O95273 360 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 FCGR1AP12314 374 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 TIE1P35590 1138 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
HIF3A-205ENST00000377670 VN1R5Q7Z5H4 357 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 STRA8Q7Z7C7 330 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CYP4Z1Q86W10 505 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 UBASH3BQ8TF42 649 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 IRF7Q92985 503 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 COL26A1Q96A83 441 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CCDC126Q96EE4 140 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 ASB8Q9H765 288 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 RGPD1P0DJD0 1748 aa10.88□□□□□ -0.67
HIF3A-205ENST00000377670 CLOCKO15516 846 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TIMM44O43615 452 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SLC10A3P09131 477 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 IL12RB1P42701 662 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TRIM71Q2Q1W2 868 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ATP6AP1LQ52LC2 224 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TTC29Q8NA56 475 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF75CPQ92670 426 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 RAD9AQ99638 391 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 DNAJC11Q9NVH1 559 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 CICQ96RK0 1608 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 SLC25A14O95258 325 aaPredicted RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 MT-CO1P00395 513 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PCCBP05166 539 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ELK3P41970 407 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 PTDSS1P48651 473 aaKnown RBP10.87□□□□□ -0.67
HIF3A-205ENST00000377670 TAS2R40P59535 323 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 KCNJ2P63252 427 aa10.87□□□□□ -0.67
HIF3A-205ENST00000377670 ACAP1Q15027 740 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms