RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CDK16Q00536 496 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 MS4A13Q5J8X5 152 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 LAYNQ6UX15 382 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 FGF13Q92913 245 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 P2RY13Q9BPV8 354 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 OSBPL6Q9BZF3 934 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 SMOC2Q9H3U7 446 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 PSMD13Q9UNM6 376 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 PIAS3Q9Y6X2 628 aa8.53□□□□□ -1.04
CRNKL1-202ENST00000377340 GNG14A0A1W2PPG7 69 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 GSAPA4D1B5 854 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 KIAA0355O15063 1070 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SEC24AO95486 1093 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ITGAVP06756 1048 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SLC35G4P0C7Q5 338 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 STK19P49842 368 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 IL2P60568 153 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 PHEXP78562 749 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 UBE3AQ05086 875 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 TMEM25Q86YD3 366 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 TMEM139Q8IV31 216 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SLC44A2Q8IWA5 706 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 OR52K2Q8NGK3 314 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 RHBGQ9H310 441 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ELOVL6Q9H5J4 265 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 IL1RL2Q9HB29 575 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 AKAP7Q9P0M2 348 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 FAM95CA0A1B0GW59 222 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 MATN3O15232 486 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CLASP2O75122 1294 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 HOXB8P17481 243 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CYP2A7P20853 494 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ELP6Q0PNE2 266 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 PRKG2Q13237 762 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SRLQ86TD4 932 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 HLA-CQ95604 372 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CERS2Q96G23 380 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 NPY6RQ99463 290 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 NINJ2Q9NZG7 142 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 RCOR3Q9P2K3 495 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ZNF212Q9UDV6 495 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 MYH10P35580 1976 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ADAMTS7Q9UKP4 1686 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CCDC166P0CW27 439 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 DDX6P26196 483 aaKnown RBP eCLIP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ALDH9A1P49189 494 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CCNHP51946 323 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 FSCBQ5H9T9 825 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 PPP4R4Q6NUP7 873 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 TPRG1Q6ZUI0 275 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 OR4L1Q8NH43 312 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 CCDC124Q96CT7 223 aaKnown RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 MFSD3Q96ES6 412 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 NECTIN4Q96NY8 510 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ROPN1BQ9BZX4 212 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 OSBPL2Q9H1P3 480 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 ROPN1Q9HAT0 212 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SPHK2Q9NRA0 654 aa8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 SPATA6Q9NWH7 488 aaPredicted RBP8.52□□□□□ -1.05
CRNKL1-202ENST00000377340 C5orf60A6NFR6 353 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 MTX2O75431 263 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 ALPIP09923 528 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 ALOX15P16050 662 aaPredicted RBP8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 KELP23276 732 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 IGFBP6P24592 240 aaPredicted RBP8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 CCNCP24863 283 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 TNK2Q07912 1038 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 ITGA9Q13797 1035 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 SPANXN3Q5MJ09 141 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 SPPL3Q8TCT6 385 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 TPSD1Q9BZJ3 242 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 ALG9Q9H6U8 611 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 LRRC19Q9H756 370 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 BCAP29Q9UHQ4 241 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 TRIM33Q9UPN9 1127 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 MFHAS1Q9Y4C4 1052 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 LY75O60449 1722 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 MCM3APO60318 1980 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 GLYATL1P3A0A0U1RQE8 302 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 STC2O76061 302 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 KAT7O95251 611 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 PIGNO95427 931 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 RBP1P09455 135 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 CPA3P15088 417 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 SOAT1P35610 550 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 TTPAP49638 278 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 IL10RBQ08334 325 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 SLC20A2Q08357 652 aa8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.05
CRNKL1-202ENST00000377340 TCEAL8Q8IYN2 117 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms