RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PFKFB4Q16877 469 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 FUT11Q495W5 492 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 LIN52Q52LA3 116 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 TAF2Q6P1X5 1199 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 FBXL19Q6PCT2 694 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 CUZD1Q86UP6 607 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 STYXQ8WUJ0 223 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 Q9H521 79 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 NSMCE4AQ9NXX6 385 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 ACTL7AQ9Y615 435 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 SIP14410 1827 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 ZNF638Q14966 1978 aaKnown RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 PSMD12O00232 456 aaPredicted RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 PPP6CO00743 305 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 ATP5BP06576 529 aaKnown RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 PRSS56P0CW18 603 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 SERPINH1P50454 418 aaKnown RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 TLR1Q15399 786 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 PGM2L1Q6PCE3 622 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 LSMEM2Q8N112 164 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.32
USP11-204ENST00000377107 SH3GL3Q99963 347 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 KIFC1Q9BW19 673 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 RGS18Q9NS28 235 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 ANKRD6Q9Y2G4 727 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 HS3ST4Q9Y661 456 aa13.02□□□□□ -0.32
USP11-204ENST00000377107 A0A1B0GVG6 124 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 E7ENX8 843 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 MATN3O15232 486 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 MGEA5O60502 916 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ATP5F1P24539 256 aaPredicted RBP13.02□□□□□ -0.33
USP11-204ENST00000377107 ARSDP51689 593 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 GSTA3Q16772 222 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 CNPY1Q3B7I2 92 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ALFQ53S48 1182 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 IL23RQ5VWK5 629 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 TTC9BQ8N6N2 239 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 EFHBQ8N7U6 833 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ANKRD49Q8WVL7 239 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 TNFRSF12AQ9NP84 129 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
USP11-204ENST00000377107 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 SLC12A8A0AV02 714 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CLPTM1O96005 669 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 GLDCP23378 1020 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CCNCP24863 283 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 PBX3P40426 434 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 DPP6P42658 865 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 KPNA2P52292 529 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 CHN2P52757 468 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TBX4P57082 545 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 ZNF235Q14590 738 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 UPP1Q16831 310 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CLEC14AQ86T13 490 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MRGPRX2Q96LB1 330 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MRPL57Q9BQC6 102 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 BCAP29Q9UHQ4 241 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 NT5C1B-RDH14C9J2C7 533 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MRASO14807 208 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 GPR182O15218 404 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 PSMD3O43242 534 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 H2AFYO75367 372 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 CES1P23141 567 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 RPL34P49207 117 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 C1QTNF8P60827 252 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CAPRIN1Q14444 709 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 HECTD2Q5U5R9 776 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 METTL21CQ5VZV1 264 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TUBGCP3Q96CW5 907 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 RPL10LQ96L21 214 aaKnown RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 CIB1Q99828 191 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 SEMA3CQ99985 751 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MARCH4Q9P2E8 410 aaPredicted RBP13.01□□□□□ -0.33
USP11-204ENST00000377107 ARL5AQ9Y689 179 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 FAM149AA5PLN7 773 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TADA2AO75478 443 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MT-ND1P03886 318 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 ARNTP27540 789 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 OR1E1P30953 314 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 CDK18Q07002 472 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
USP11-204ENST00000377107 SH3RF2Q8TEC5 729 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms