RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 COG7P83436 770 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 CREB5Q02930 508 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-202ENST00000376839 MTX3Q5HYI7 312 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 CUZD1Q86UP6 607 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 PHF21BQ96EK2 531 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 IL12RB2Q99665 862 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 SLC39A8Q9C0K1 460 aa13.33□□□□□ -0.28
ACTN1-202ENST00000376839 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-202ENST00000376839 A0A087X1B8 175 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 H3BSA7 217 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ANXA9O76027 345 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 TSPAN8P19075 237 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PSMD8P48556 350 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SLC12A2P55011 1212 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ADAM17P78536 824 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 IKBKEQ14164 716 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 MFSD10Q14728 455 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 DRAXINQ8NBI3 349 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-202ENST00000376839 FAM110BQ8TC76 370 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 GRIN3AQ8TCU5 1115 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SLC29A1Q99808 456 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ABHD16BQ9H3Z7 469 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 MEAF6Q9HAF1 191 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PDHXO00330 501 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 UBDO15205 165 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 STRNO43815 780 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 YWHAQP27348 245 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SLC5A2P31639 672 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 POLD2P49005 469 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PFKPQ01813 784 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 RHDQ02161 417 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SQLEQ14534 574 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PCSK7Q16549 785 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PITRM1Q5JRX3 1037 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 C6orf10Q5SRN2 563 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 NEPROQ6NW34 567 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 POTEHQ6S545 545 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 GPR142Q7Z601 462 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 NPLOC4Q8TAT6 608 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 MRGPRX2Q96LB1 330 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ZNF597Q96LX8 424 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 PAAF1Q9BRP4 392 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 FSD1LQ9BXM9 530 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 CNOT11Q9UKZ1 510 aaKnown RBP13.32□□□□□ -0.28
ACTN1-202ENST00000376839 SNX13Q9Y5W8 968 aa13.32□□□□□ -0.28
ACTN1-202ENST00000376839 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 HEATR9A2RTY3 570 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 IPO13O94829 963 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 USP46P62068 366 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 POU4F1Q01851 419 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 STX5Q13190 355 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CLEC6AQ6EIG7 209 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 KIAA0930Q6ICG6 404 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 HMBOX1Q6NT76 420 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CYHR1Q6ZMK1 362 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 MYO1HQ8N1T3 1032 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ANKRD49Q8WVL7 239 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SMARCD1Q96GM5 515 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 FBRSL1Q9HCM7 1045 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■□□□ 12.7
ACTN1-202ENST00000376839 MIOSQ9NXC5 875 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SARDHQ9UL12 918 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ARHGEF37A1IGU5 675 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 UBFD1O14562 309 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 BDNFP23560 247 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 LHX1P48742 406 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ZNF135P52742 658 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 GEMP55040 296 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 NR1H2P55055 460 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ZNF33AQ06730 810 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 IQSEC1Q6DN90 963 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 GAD1Q99259 594 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CIB1Q99828 191 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 SPAG4Q9NPE6 437 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 PLOD2O00469 737 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 MRASO14807 208 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 MATN3O15232 486 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 MSI1O43347 362 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 HNRNPRO43390 633 aaKnown RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 TMCC1O94876 653 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 PENKP01210 267 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-202ENST00000376839 FAM83EQ2M2I3 478 aa13.31□□□□□ -0.28
ACTN1-202ENST00000376839 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms