RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 ZNF542PQ5EBM4 170 aa13.65□□□□□ -0.23
DDR1-225ENST00000376568 RASGEF1CQ8N431 466 aa13.65□□□□□ -0.23
DDR1-225ENST00000376568 SCAMP4Q969E2 229 aa13.65□□□□□ -0.23
DDR1-225ENST00000376568 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.23
DDR1-225ENST00000376568 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.23
DDR1-225ENST00000376568 LOC100653049A0A140TA62 436 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 MATN3O15232 486 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 KRT34O76011 436 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PDHA1P08559 390 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 H2AFXP16104 143 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 STMN1P16949 149 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 DHCR24Q15392 516 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 DPY19L3Q6ZPD9 716 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 MED8Q96G25 268 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 TEKT5Q96M29 485 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 H2AFJQ9BTM1 129 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 SPHK2Q9NRA0 654 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 COLQQ9Y215 455 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 GPSM3Q9Y4H4 160 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 TOP3BO95985 862 aaKnown RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 PCCBP05166 539 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 RALBP11234 206 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PLCL1Q15111 1095 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PON2Q15165 354 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 INSCQ1MX18 579 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 WDR93Q6P2C0 686 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 USP45Q70EL2 814 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 MYO19Q96H55 970 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 CFAP20Q9Y6A4 193 aaKnown RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 DOCK6Q96HP0 2047 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 A0A096LPK6 155 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HACD1B0YJ81 288 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 INSIG1O15503 277 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 FFAR2O15552 330 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 CLDN7O95471 211 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
DDR1-225ENST00000376568 MSH3P20585 1137 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 CREB5Q02930 508 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 MMEL1Q495T6 779 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 CXorf40AQ8TE69 158 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 SMARCD2Q92925 531 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HBEGFQ99075 208 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 HERC2P3Q9BVR0 1158 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 ZFYVE1Q9HBF4 777 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 GDF3Q9NR23 364 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 KLHL3Q9UH77 587 aa13.64□□□□□ -0.23
DDR1-225ENST00000376568 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CLUHO75153 1309 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 SYNDIG1LA6NDD5 238 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
DDR1-225ENST00000376568 PRPF39Q86UA1 669 aaKnown RBP13.63□□□□□ -0.23
DDR1-225ENST00000376568 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 HDDC3Q8N4P3 179 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ZCCHC9Q8N567 271 aaKnown RBP13.63□□□□□ -0.23
DDR1-225ENST00000376568 SLC35B2Q8TB61 432 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 PLD4Q96BZ4 506 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CERS2Q96G23 380 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 MECRQ9BV79 373 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 DRG1Q9Y295 367 aaKnown RBP13.63□□□□□ -0.23
DDR1-225ENST00000376568 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 PSMD3O43242 534 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 MTA2O94776 668 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 PRSS56P0CW18 603 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 PTGIRP43119 386 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CDH13P55290 713 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ITGA9Q13797 1035 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 TRIM48Q8IWZ4 208 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 C10orf67Q8IYJ2 551 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 OR8D1Q8WZ84 308 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 SFXN1Q9H9B4 322 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 FBXO5Q9UKT4 447 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CPA2P48052 419 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 PPP3CCP48454 512 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 CD151P48509 253 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ENPEPQ07075 957 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 FAM78AQ5JUQ0 283 aa13.63□□□□□ -0.23
DDR1-225ENST00000376568 UBR7Q8N806 425 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms