RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MAP3K10Q02779 954 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ADGRE1Q14246 886 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TIGD2Q4W5G0 525 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SLC39A12Q504Y0 691 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GRAMD4Q6IC98 578 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ANGPTL8Q6UXH0 198 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CCDC81Q6ZN84 652 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TXNDC5Q8NBS9 432 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TMEM174Q8WUU8 243 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TMIGD2Q96BF3 282 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TEKT5Q96M29 485 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GBA3Q9H227 469 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SPC25Q9HBM1 224 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ADARB2Q9NS39 739 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SF3B1O75533 1304 aaKnown RBP eCLIP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 IGKV6-21A0A0C4DH24 114 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ZBTB11O95625 1053 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 INSCQ1MX18 579 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ZYG11AQ6WRX3 759 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ZBED3Q96IU2 234 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CAMKK2Q96RR4 588 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 DGCR6LQ9BY27 220 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SLC39A8Q9C0K1 460 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GLOD4Q9HC38 313 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SLC27A5Q9Y2P5 690 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NDUFAF1Q9Y375 327 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NME7Q9Y5B8 376 aa14.48□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 MATN2O00339 956 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NCAM2O15394 837 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CCNT2O60583 730 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SH3BGRP55822 239 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 MSLNQ13421 630 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ZNF410Q86VK4 478 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GRIN3AQ8TCU5 1115 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ABHD16BQ9H3Z7 469 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SPAG4Q9NPE6 437 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 DPYSL4O14531 572 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CXCL11O14625 94 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NRP2O60462 931 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NIPAL4Q0D2K0 466 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 PSMD5Q16401 504 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SH2D5Q6ZV89 423 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 PGAM4Q8N0Y7 254 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 PPTC7Q8NI37 304 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 KBTBD7Q8WVZ9 684 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ARMC7Q9H6L4 198 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 POLR1BQ9H9Y6 1135 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ADAMTS5Q9UNA0 930 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ST3GAL5Q9UNP4 418 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 C1orf232A0A0U1RR37 186 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 UBXN8O00124 270 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 LTA4HP09960 611 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GHRHRQ02643 423 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ZFP1Q6P2D0 407 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 PIWIL4Q7Z3Z4 852 aaKnown RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 APLFQ8IW19 511 aaPredicted RBP14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GPC2Q8N158 579 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CDYL2Q8N8U2 506 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TSPAN17Q96FV3 270 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SEMA3CQ99985 751 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 NSMCE4AQ9NXX6 385 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 VTI1BQ9UEU0 232 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 U3KQV3 271 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GON4LQ3T8J9 2241 aa14.47□□□□□ -0.09
TNFRSF1B-201ENST00000376259 A0A0J9YYE9 177 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SLCO1B7G3V0H7 640 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 BTN3A1O00481 513 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 STRNO43815 780 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TFPTP0C1Z6 253 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 OR1E1P30953 314 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SERPINH1P50454 418 aaKnown RBP14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 C9orf131Q5VYM1 1079 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 FNDC5Q8NAU1 212 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 ARRDC4Q8NCT1 418 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 HSPBAP1Q96EW2 488 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SMOQ99835 787 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 DRC3Q9H069 523 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 LATS2Q9NRM7 1088 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 VWA7Q9Y334 891 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 SBF2Q86WG5 1849 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TRIP11Q15643 1979 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TMEM114B3SHH9 223 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 G3V2L1 256 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 PPP6CO00743 305 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 MAGEB3O15480 346 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 GLP2RO95838 553 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 CDKL1Q00532 357 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TRAF2Q12933 501 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 FBXO30Q8TB52 745 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 FAM81AQ8TBF8 368 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 FIG4Q92562 907 aa14.46□□□□□ -0.09
TNFRSF1B-201ENST00000376259 TMEM209Q96SK2 561 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms