RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 FAM72BQ86X60 149 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 GATA6Q92908 595 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 SLC7A6OSQ96CW6 309 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 FCRL2Q96LA5 508 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 PLEKHG4BQ96PX9 1271 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 NR1H4Q96RI1 486 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TRMT61BQ9BVS5 477 aaKnown RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 MYLK2Q9H1R3 596 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 MANSC1Q9H8J5 431 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 MAD1L1Q9Y6D9 718 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 FAM159BA6NKW6 160 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TRIM49D1C9J1S8 452 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 EEF2KO00418 725 aaKnown RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 KRT38O76015 456 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 PFKLP17858 780 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 ETV4P43268 484 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 SERPINB9P50453 376 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 KPNB1Q14974 876 aaKnown RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TRIP4Q15650 581 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TPGS1Q6ZTW0 290 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 YAF2Q8IY57 180 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 P2RY11Q96G91 374 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 SERPINB11Q96P15 392 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 HAPLN3Q96S86 360 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 LGMNQ99538 433 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 DUS2Q9NX74 493 aaKnown RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 ZMYM5Q9UJ78 669 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 AGO1Q9UL18 857 aaKnown RBP14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TLR6Q9Y2C9 796 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 SNX10Q9Y5X0 201 aa14.45□□□□□ -0.1
HMGA1-203ENST00000374116 TICRRQ7Z2Z1 1910 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 SOBPA7XYQ1 873 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 CXorf49A8MYA2 514 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-203ENST00000374116 RNF103O00237 685 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 COPEO14579 308 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGA1-203ENST00000374116 WEE1P30291 646 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 SOX9P48436 509 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 ZNF135P52742 658 aaPredicted RBP14.44□□□□□ -0.1
HMGA1-203ENST00000374116 AP1B1Q10567 949 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 STEAP4Q687X5 459 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 LRRC8BQ6P9F7 803 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 CCNJLQ8IV13 435 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 C10orf82Q8WW14 230 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 SLC39A13Q96H72 371 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 LRRC37BQ96QE4 947 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 TRIM62Q9BVG3 475 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 TBC1D10AQ9BXI6 508 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 IQCGQ9H095 443 aaKnown RBP14.44□□□□□ -0.1
HMGA1-203ENST00000374116 BRD9Q9H8M2 597 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 PLK2Q9NYY3 685 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
HMGA1-203ENST00000374116 WDR91A4D1P6 747 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 TSPAN3O60637 253 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 CNTFP26441 200 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 CCNFP41002 786 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 FCHO2Q0JRZ9 810 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 TDGQ13569 410 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 NADSYN1Q6IA69 706 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 RFWD3Q6PCD5 774 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 MPP5Q8N3R9 675 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 MYEOVQ96EZ4 313 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 TKTL2Q9H0I9 626 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SAR1AQ9NR31 198 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SMYD2Q9NRG4 433 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 MOCS1Q9NZB8 636 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 TBC1D30Q9Y2I9 924 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 HBS1LQ9Y450 684 aaKnown RBP14.43□□□□□ -0.1
HMGA1-203ENST00000374116 A0A1B0GVG6 124 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 NCAM2O15394 837 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 ALDH1A2O94788 518 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 IL1BP01584 269 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 IGLV3-27P01718 113 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 ERCC2P18074 760 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 PTPN4P29074 926 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SLC6A4P31645 630 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 HARS2P49590 506 aaKnown RBP14.43□□□□□ -0.1
HMGA1-203ENST00000374116 POLE2P56282 527 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 WASHC5Q12768 1159 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 ARL13BQ3SXY8 428 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 ARTNQ5T4W7 220 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 Q6ZNB5 142 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 HTR3DQ70Z44 454 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 LONP2Q86WA8 852 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 ADGRG2Q8IZP9 1017 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 CCNYQ8ND76 341 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 PHC3Q8NDX5 983 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 PLD4Q96BZ4 506 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 FAM111AQ96PZ2 611 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SRPK1Q96SB4 655 aaKnown RBP14.43□□□□□ -0.1
HMGA1-203ENST00000374116 FAM83CQ9BQN1 747 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 NAT9Q9BTE0 207 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 SIK2Q9H0K1 926 aa14.43□□□□□ -0.1
HMGA1-203ENST00000374116 DENND2DQ9H6A0 471 aaPredicted RBP14.43□□□□□ -0.1
HMGA1-203ENST00000374116 WDCPQ9H6R7 721 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms