RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PAGE1O75459 146 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 IPO13O94829 963 aaKnown RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 EPHX2P34913 555 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 INHBCP55103 352 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 CSHL1Q14406 222 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 SLC5A9Q2M3M2 681 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 NEPROQ6NW34 567 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 FAR2Q96K12 515 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 UBXN10Q96LJ8 280 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 PRKD2Q9BZL6 878 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ARNT2Q9HBZ2 717 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 CHST12Q9NRB3 414 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ARL5CA6NH57 179 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PMPCBO75439 489 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 TCN1P20061 433 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 RGS2P41220 211 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 SH3BGRP55822 239 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 SQLEQ14534 574 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 C8orf82Q6P1X6 216 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CCDC126Q96EE4 140 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 DUS3LQ96G46 650 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ACBD6Q9BR61 282 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 OSER1Q9NX31 292 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 H0YJX3 145 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 WISP3O95389 354 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 MYL3P08590 195 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 STX5Q13190 355 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PPP1R3AQ16821 1122 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 FAM83EQ2M2I3 478 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 MGAT5BQ3V5L5 792 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 NADK2Q4G0N4 442 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 KDELC1Q6UW63 502 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CYHR1Q6ZMK1 362 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CUZD1Q86UP6 607 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PCDH20Q8N6Y1 951 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 LPPQ93052 612 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 FSD1LQ9BXM9 530 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CATSPERBQ9H7T0 1116 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CD300AQ9UGN4 299 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CASTOR2A6NHX0 329 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PEX11BO96011 259 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 RPL9P32969 192 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 CPT1AP50416 773 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 BEX3Q00994 111 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 REP15Q6BDI9 236 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 TIGD7Q6NT04 549 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PAOXQ6QHF9 649 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 RBM44Q6ZP01 1051 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 FCRL2Q96LA5 508 aaPredicted RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PCDHAC1Q9H158 963 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 EML4Q9HC35 981 aaKnown RBP12.84□□□□□ -0.35
CTPS1-202ENST00000372621 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 ST3GAL5Q9UNP4 418 aa12.84□□□□□ -0.35
CTPS1-202ENST00000372621 KLHL33A6NCF5 533 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 FAM58BPP0C7Q3 252 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 PGFP49763 221 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SLC12A2P55011 1212 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 RHDQ02161 417 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TRAP1Q12931 704 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 NOMO2Q5JPE7 1267 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 AGAP9Q5VTM2 703 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 AGMOQ6ZNB7 445 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 RPS27LQ71UM5 84 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 GALNT7Q86SF2 657 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 LRRTM3Q86VH5 581 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 GALNT4Q8N4A0 578 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 NMD3Q96D46 503 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ZNF597Q96LX8 424 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 RANBP9Q96S59 729 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TRIM62Q9BVG3 475 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ZCWPW1Q9H0M4 648 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SMOC2Q9H3U7 446 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CYP4F12Q9HCS2 524 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 MRPL40Q9NQ50 206 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TBC1D13Q9NVG8 400 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 APPL1Q9UKG1 709 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms