RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NAT16Q8N8M0 369 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 ATP2A3Q93084 1043 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 RPL10LQ96L21 214 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 TM6SF2Q9BZW4 377 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 ZFP14Q9HCL3 533 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 INTS9Q9NV88 658 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 NKIRAS1Q9NYS0 192 aa26.5■■□□□ 1.83
ATPAF1-202ENST00000371937 FAM47DPA6NHR8 397 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 VAPBO95292 243 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 SRCP12931 536 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 CTSOP43234 321 aaPredicted RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 DNAJC3Q13217 504 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 TRIM68Q6AZZ1 485 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 BLOC1S5Q8TDH9 187 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 CEP44Q9C0F1 390 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 PRO3102Q9H379 93 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 CLEC1BQ9P126 229 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 PRLP01236 227 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 POLR2EP19388 210 aaKnown RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 ARCN1P48444 511 aaKnown RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 SNRPD1P62314 119 aaKnown RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 PDGFRLQ15198 375 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 TTC19Q6DKK2 380 aaPredicted RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 ADIPOR2Q86V24 386 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 GABPB2Q8TAK5 448 aaPredicted RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 IARS2Q9NSE4 1012 aaKnown RBP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 SLC17A6Q9P2U8 582 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 SLC2A6Q9UGQ3 507 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 PSAT1Q9Y617 370 aa26.49■■□□□ 1.83
ATPAF1-202ENST00000371937 LDB2O43679 373 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 PPARDQ03181 441 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 TRAF2Q12933 501 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 MROH9Q5TGP6 573 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 OR2AP1Q8NGE2 309 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 AGAP2Q99490 1192 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 RIMKLBQ9ULI2 386 aa26.48■■□□□ 1.83
ATPAF1-202ENST00000371937 ANKRD66B4E2M5 251 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 CRTAMO95727 393 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 FCARP24071 287 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 SPRP35270 261 aaPredicted RBP26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 DGKGP49619 791 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 STK19P49842 368 aaPredicted RBP26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 THOC5Q13769 683 aaKnown RBP26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 SMAD1Q15797 465 aaKnown RBP26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 DGKKQ5KSL6 1271 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 MBLAC2Q68D91 279 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 TIFABQ6ZNK6 161 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 STRA8Q7Z7C7 330 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 CNTN4Q8IWV2 1026 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 LPCAT1Q8NF37 534 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 PDCD6IPQ8WUM4 868 aaKnown RBP26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 ASIC4Q96FT7 647 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 RIPOR3Q96MK2 946 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 S1PR5Q9H228 398 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 MYLKQ15746 1914 aa26.47■■□□□ 1.83
ATPAF1-202ENST00000371937 SPAG7O75391 227 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ZNF821O75541 412 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 PDHA1P08559 390 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 CSE1LP55060 971 aaKnown RBP26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 BCL2L1Q07817 233 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 PCDH20Q8N6Y1 951 aaKnown RBP26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 SGSM3Q96HU1 749 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 SERAC1Q96JX3 654 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 FAM83CQ9BQN1 747 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 FAM167BQ9BTA0 163 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 EVLQ9UI08 416 aaPredicted RBP26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 TYROBPO43914 113 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ITGA2BP08514 1039 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ARNTP27540 789 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 LSP1P33241 339 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 BMPR2Q13873 1038 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 MPP2Q14168 576 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 UGP2Q16851 508 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ARMC12Q5T9G4 340 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 TANGO2Q6ICL3 276 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 C22orf39Q6P5X5 142 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ANKRD42Q8N9B4 389 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 CALML6Q8TD86 181 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 WFIKKN2Q8TEU8 576 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 RBBP8Q99708 897 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 TNKS2Q9H2K2 1166 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 EBF3Q9H4W6 596 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 ATP13A3Q9H7F0 1226 aa26.46■■□□□ 1.83
ATPAF1-202ENST00000371937 HMX2A2RU54 273 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 GOLGA8TH3BQL2 631 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 FZD6O60353 706 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 SOCS5O75159 536 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 SIN3BO75182 1162 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 GSRP00390 522 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 ARSAP15289 507 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 RPL26P61254 145 aaKnown RBP26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 SLC18A2Q05940 514 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 CTC1Q2NKJ3 1217 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 ACCSLQ4AC99 568 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 BANPQ8N9N5 519 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 OR13J1Q8NGT2 312 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 PTPRN2Q92932 1015 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 ZFYVE19Q96K21 471 aa26.45■■□□□ 1.82
ATPAF1-202ENST00000371937 RPL26L1Q9UNX3 145 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms