RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 POMKQ9H5K3 350 aa29.16■■■□□ 2.26
SSBP3-204ENST00000371320 UXTQ9UBK9 157 aaPredicted RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 G3BP2Q9UN86 482 aaKnown RBP29.16■■■□□ 2.26
SSBP3-204ENST00000371320 BPTFQ12830 3046 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 EIF4E1BA6NMX2 242 aaKnown RBP29.15■■■□□ 2.26
SSBP3-204ENST00000371320 ETFBP38117 255 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 DNAJB13P59910 316 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 TNK2Q07912 1038 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 IL10RBQ08334 325 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 MGAT5BQ3V5L5 792 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 SIRPB2Q5JXA9 342 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 PIWIL4Q7Z3Z4 852 aaKnown RBP29.15■■■□□ 2.26
SSBP3-204ENST00000371320 CCDC124Q96CT7 223 aaKnown RBP29.15■■■□□ 2.26
SSBP3-204ENST00000371320 TSPAN17Q96FV3 270 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 SEPT5Q99719 369 aaPredicted RBP29.15■■■□□ 2.26
SSBP3-204ENST00000371320 CCDC28BQ9BUN5 200 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 S100A14Q9HCY8 104 aa29.15■■■□□ 2.26
SSBP3-204ENST00000371320 RGSL1A5PLK6 1076 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 MOXD2PA6NHM9 499 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 SORBS2O94875 1100 aaKnown RBP29.14■■■□□ 2.26
SSBP3-204ENST00000371320 PARP15Q460N3 678 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 AGAP9Q5VTM2 703 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 NXNQ6DKJ4 435 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 TRIM67Q6ZTA4 783 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 PTAR1Q7Z6K3 402 aaPredicted RBP29.14■■■□□ 2.26
SSBP3-204ENST00000371320 RNF135Q8IUD6 432 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 FBXW8Q8N3Y1 598 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 PGBD5Q8N414 524 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 OR6P1Q8NGX9 317 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 ARRDC2Q8TBH0 407 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 MICAL1Q8TDZ2 1067 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 ZNF184Q99676 751 aaPredicted RBP29.14■■■□□ 2.26
SSBP3-204ENST00000371320 CASP8AP2Q9UKL3 1982 aa29.14■■■□□ 2.26
SSBP3-204ENST00000371320 MROH6A6NGR9 719 aa29.14■■■□□ 2.25
SSBP3-204ENST00000371320 SLC7A4O43246 635 aa29.14■■■□□ 2.25
SSBP3-204ENST00000371320 PDCD2Q16342 344 aaPredicted RBP29.14■■■□□ 2.25
SSBP3-204ENST00000371320 CILP2Q8IUL8 1156 aa29.14■■■□□ 2.25
SSBP3-204ENST00000371320 PLCD3Q8N3E9 789 aa29.14■■■□□ 2.25
SSBP3-204ENST00000371320 CPSF7Q8N684 471 aaKnown RBP29.14■■■□□ 2.25
SSBP3-204ENST00000371320 SMNDC1O75940 238 aaKnown RBP eCLIP29.13■■■□□ 2.255e-8■■■□□ 15.6
SSBP3-204ENST00000371320 IGLV3-27P01718 113 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 COL6A1P12109 1028 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 OR1E1P30953 314 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 PPARGP37231 505 aaPredicted RBP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SP3Q02447 781 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 NSUN2Q08J23 767 aaKnown RBP eCLIP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SERINC3Q13530 473 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SNX32Q86XE0 403 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 HPS6Q86YV9 775 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 KDM1BQ8NB78 822 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 TADA1Q96BN2 335 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 FAM136AQ96C01 138 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 DOCK4Q8N1I0 1966 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SLC22A2O15244 555 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SNUPNO95149 360 aaKnown RBP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 JUNP05412 331 aaKnown RBP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 LTA4HP09960 611 aaKnown RBP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 KLC1Q07866 573 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 CCNIQ14094 377 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 LBRQ14739 615 aaKnown RBP29.13■■■□□ 2.25
SSBP3-204ENST00000371320 TECRLQ5HYJ1 363 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 KLC3Q6P597 504 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 KBTBD2Q8IY47 623 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 SLC26A7Q8TE54 656 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 PYDC1Q8WXC3 89 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 JADE3Q92613 823 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 HDAC10Q969S8 669 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 MFSD1Q9H3U5 465 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 POMPQ9Y244 141 aa29.13■■■□□ 2.25
SSBP3-204ENST00000371320 MTMR11A4FU01 709 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 NEMP2A6NFY4 417 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 AIM2O14862 343 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 PRAMEP78395 509 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 SH2D4BQ5SQS7 431 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 ACBD5Q5T8D3 534 aaPredicted RBP29.12■■■□□ 2.25
SSBP3-204ENST00000371320 HECTD2Q5U5R9 776 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 GALNT7Q86SF2 657 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 EFCAB3Q8N7B9 438 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 RP9Q8TA86 221 aaKnown RBP29.12■■■□□ 2.25
SSBP3-204ENST00000371320 SPPL2BQ8TCT7 592 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 CATSPER2Q96P56 530 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 CRISPLD1Q9H336 500 aa29.12■■■□□ 2.25
SSBP3-204ENST00000371320 LOC285095A0A1B0GVY8 99 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 CCDC166P0CW27 439 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 CD1EP15812 388 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 FGFR3P22607 806 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ACVRL1P37023 503 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 PBX3P40426 434 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 TCHHL1Q5QJ38 904 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 PNPLA1Q8N8W4 532 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 VWA7Q9Y334 891 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 CCL22O00626 93 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ALDH2P05091 517 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ATXN1LP0C7T5 689 aaKnown RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ADSLP30566 484 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 NUDT2P50583 147 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 ARSDP51689 593 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 MTTPP55157 894 aa29.11■■■□□ 2.25
SSBP3-204ENST00000371320 YBEYP58557 167 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-204ENST00000371320 MRPS35P82673 323 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms