RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 NCKIPSDQ9NZQ3 722 aa20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 CWC15Q9P013 229 aaKnown RBP20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 LHX6Q9UPM6 363 aa20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 RAXQ9Y2V3 346 aa20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 LUC7L2Q9Y383 392 aaKnown RBP20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 CSNK1G3Q9Y6M4 447 aa20.6■□□□□ 0.89
CUEDC2-201ENST00000369937 SPEGQ15772 3267 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 K7ESM1 405 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 AQP9O43315 295 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 NEBLO76041 1014 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 CSNK1DP48730 415 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 POLR2LP62875 67 aaKnown RBP20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 BCL2L1Q07817 233 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 LRRC14Q15048 493 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 SMTNL2Q2TAL5 461 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 TMCO3Q6UWJ1 677 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 IL12RB2Q99665 862 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 SLC13A1Q9BZW2 595 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 PCDH12Q9NPG4 1184 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 SPASTQ9UBP0 616 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 IP6K2Q9UHH9 426 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 CAPN11Q9UMQ6 739 aa20.59■□□□□ 0.89
CUEDC2-201ENST00000369937 LZTS3O60299 673 aaPredicted RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 IGFALSP35858 605 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 EIF4A3P38919 411 aaKnown RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 SSR1P43307 286 aaKnown RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 SCNN1BP51168 640 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 INSM1Q01101 510 aaPredicted RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 NSUN2Q08J23 767 aaKnown RBP eCLIP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 FAXCQ5TGI0 409 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 AFMIDQ63HM1 303 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 HGSNATQ68CP4 663 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 ZCCHC8Q6NZY4 707 aaKnown RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 ARHGAP12Q8IWW6 846 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 BBS5Q8N3I7 341 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 NPWQ8N729 165 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 FAM181AQ8N9Y4 354 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 NSMCE1Q8WV22 266 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 GLMNQ92990 594 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 THAP2Q9H0W7 228 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 IFNKQ9P0W0 207 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 SEPT3Q9UH03 358 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 APOBEC3BQ9UH17 382 aaKnown RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 ANAPC7Q9UJX3 599 aa20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 RALYQ9UKM9 306 aaKnown RBP20.58■□□□□ 0.89
CUEDC2-201ENST00000369937 WDFY3Q8IZQ1 3526 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 TSPAN11A1L157 253 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 TMEM110-MUSTN1A8MSY1 372 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 RIOK3O14730 519 aaKnown RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 BUB1BO60566 1050 aaPredicted RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 GIMD1P0DJR0 217 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 C6P13671 934 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 HTR1BP28222 390 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 PBX1P40424 430 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 BLKP51451 505 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 EIF2B5Q13144 721 aaKnown RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 DPYSQ14117 519 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 ZNF235Q14590 738 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 LBRQ14739 615 aaKnown RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 DPYSL2Q16555 572 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 C19orf48Q6RUI8 117 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 MACC1Q6ZN28 852 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 CYP4V2Q6ZWL3 525 aaPredicted RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 CACTIN-AS1Q8N1I8 211 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 TP53I13Q8NBR0 393 aaPredicted RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 RFFLQ8WZ73 363 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 ZNF599Q96NL3 588 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 NUP85Q9BW27 656 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 NRSN2Q9GZP1 204 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 MBNL1Q9NR56 388 aaKnown RBP20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 ATP8A1Q9Y2Q0 1164 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 COQ6Q9Y2Z9 468 aa20.57■□□□□ 0.88
CUEDC2-201ENST00000369937 MYO1FO00160 1098 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 MT-CO3P00414 261 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 GP1BAP07359 652 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 IL1R2P27930 398 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 SERPINB6P35237 376 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 RGRP47804 291 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 RPIAP49247 311 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 LIG3P49916 1009 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 AP1S1P61966 158 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 PPARDQ03181 441 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 KRT81Q14533 505 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 IRF4Q15306 451 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 DEFB133Q30KQ1 61 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 PRRT3Q5FWE3 981 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 TPRG1LQ5T0D9 272 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 CCDC122Q5T0U0 273 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 TMCO4Q5TGY1 634 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 ALKBH5Q6P6C2 394 aaKnown RBP20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 KDM7AQ6ZMT4 941 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 ARHGAP36Q6ZRI8 547 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 PHACTR4Q8IZ21 702 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 ATL2Q8NHH9 583 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 HNRNPLLQ8WVV9 542 aaKnown RBP20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 CAAP1Q9H8G2 361 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 KLF15Q9UIH9 416 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 SALL4Q9UJQ4 1053 aa20.56■□□□□ 0.88
CUEDC2-201ENST00000369937 DOLKQ9UPQ8 538 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms