RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 LEMD2Q8NC56 503 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 SHCBP1Q8NEM2 672 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 MAGED4Q96JG8 741 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 LGMNQ99538 433 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 NAA50Q9GZZ1 169 aaKnown RBP10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 MUC13Q9H3R2 512 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 NANOGQ9H9S0 305 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 PSME2Q9UL46 239 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 TSC22D4Q9Y3Q8 395 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 CPQQ9Y646 472 aa10.61□□□□□ -0.71
LYSMD1-201ENST00000368908 F5H423 210 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 PSMA4P25789 261 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NPY2RP49146 381 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 KPNA2P52292 529 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NDST1P52848 882 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC26A9Q7LBE3 791 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ZC3HC1Q86WB0 502 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ZC3H7AQ8IWR0 971 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 FSTL5Q8N475 847 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 OR52K1Q8NGK4 314 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NRBF2Q96F24 287 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MYRFLQ96LU7 910 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ALPK1Q96QP1 1244 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 TMEM39BQ9GZU3 492 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MUC3BQ9H195 1237 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 TRPV5Q9NQA5 729 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SMPD3Q9NY59 655 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 RUVBL2Q9Y230 463 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MTF2Q9Y483 593 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 RLFQ13129 1914 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 H0YAE9 185 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ACOX3O15254 700 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ITGB3P05106 788 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 GPIP06744 558 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NFICP08651 508 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MBL2P11226 248 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 RGS7P49802 495 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC7A2P52569 658 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MXD4Q14582 209 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SMAD1Q15797 465 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 TSTD2Q5T7W7 516 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 AGAP7PQ5VUJ5 663 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 DCAF15Q66K64 600 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NEPROQ6NW34 567 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC2A7Q6PXP3 512 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 CENPLQ8N0S6 344 aaPredicted RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 KCTD4Q8WVF5 259 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 CYGBQ8WWM9 190 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MOCOSQ96EN8 888 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 HGH1Q9BTY7 390 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 NT5C1AQ9BXI3 368 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 TBC1D13Q9NVG8 400 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 XPR1Q9UBH6 696 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 MFHAS1Q9Y4C4 1052 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
LYSMD1-201ENST00000368908 RNF103-CHMP3A0A140T963 221 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 TTC24A2A3L6 582 aaPredicted RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 VWA5AO00534 786 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ACKR2O00590 384 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 PFDN6O15212 129 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CELF2O95319 508 aaKnown RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CXCL8P10145 99 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CYP2C8P10632 490 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 GOT1P17174 413 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 PTPN2P17706 415 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 DNAJB2P25686 324 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ADARB1P78563 741 aaKnown RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 TNK2Q07912 1038 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 NME3Q13232 169 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ITGADQ13349 1161 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 USP10Q14694 798 aaKnown RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CBX2Q14781 532 aaPredicted RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CYBRD1Q53TN4 286 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 STRADAQ7RTN6 431 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 SNX31Q8N9S9 440 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ACVR1CQ8NER5 493 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 FBXL20Q96IG2 436 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 HHIPL1Q96JK4 782 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 GPR78Q96P69 363 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 HOPXQ9BPY8 73 aaPredicted RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 MRPL46Q9H2W6 279 aaKnown RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 RAD21L1Q9H4I0 556 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ACTR3BQ9P1U1 418 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 SNX9Q9Y5X1 595 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 ZSWIM8A7E2V4 1837 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 TMEM233B4DJY2 109 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 CLDN25C9JDP6 229 aa10.59□□□□□ -0.71
LYSMD1-201ENST00000368908 AP3B1O00203 1094 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms