RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZNF189O75820 626 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 GLP2RO95838 553 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 IGLV3-25P01717 112 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 KRT14P02533 472 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 HAPLN1P10915 354 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 NID1P14543 1247 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 IL4RP24394 825 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 KLRC2P26717 231 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ADRA1BP35368 520 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 HSPA9P38646 679 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 GLUD2P49448 558 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 CXCR3P49682 368 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ARPP19P56211 112 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 EIF3EP60228 445 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 PITX1P78337 314 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 CREMQ03060 361 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 TRADDQ15628 312 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 GLIPR1L2Q4G1C9 344 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 BRMS1LQ5PSV4 323 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 TAS1R1Q7RTX1 841 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 TAC4Q86UU9 113 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 KRT222Q8N1A0 295 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ATAD1Q8NBU5 361 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FBXO25Q8TCJ0 367 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 RNF139Q8WU17 664 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 DIO2Q92813 273 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ART4Q93070 314 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 CSPG4P5Q96PW8 444 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FAM118BQ9BPY3 351 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 WDCPQ9H6R7 721 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 RXFP3Q9NSD7 469 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 OLA1Q9NTK5 396 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 ZDHHC18Q9NUE0 388 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FAM53CQ9NYF3 392 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 OGFRQ9NZT2 677 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 PCOLCE2Q9UKZ9 415 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 SYNJ2BP-COX16A0A087WUM0 186 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 WDR27A2RRH5 827 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 PRAMEF1O95521 474 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 URODP06132 367 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 LINC00271P0C7V0 271 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 CD53P19397 219 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 YWHAQP27348 245 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 STIP1P31948 543 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 TUFMP49411 452 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 ROR1Q01973 937 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FOXD4Q12950 439 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 XRCC4Q13426 336 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 KCNC3Q14003 757 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FAM153CQ494X1 144 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ATAT1Q5SQI0 421 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 ALS2CLQ60I27 953 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 TPGS2Q68CL5 300 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 MSANTD2Q6P1R3 559 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 PRSS55Q6UWB4 352 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 ZDHHC24Q6UX98 284 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 CEP128Q6ZU80 1094 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 CHSY3Q70JA7 882 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 PQLC3Q8N755 202 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 PLD5Q8N7P1 536 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 DQX1Q8TE96 717 aaKnown RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 GDAP1L1Q96MZ0 367 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 SERPINB11Q96P15 392 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 RUFY1Q96T51 708 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 SEPT5Q99719 369 aaPredicted RBP8.95□□□□□ -0.98
TPM3-213ENST00000368545 TMEM121Q9BTD3 319 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 VN1R3Q9BXE9 311 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FOXP3Q9BZS1 431 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 NEUROG2Q9H2A3 272 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 COX16Q9P0S2 106 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 FAM153AQ9UHL3 310 aa8.95□□□□□ -0.98
TPM3-213ENST00000368545 TIAF1O95411 115 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 CD3EP07766 207 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 PECAM1P16284 738 aaPredicted RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 HTR7P34969 479 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 ADCY8P40145 1251 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 ETV3P41162 512 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 HCAR3P49019 387 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 PLTPP55058 493 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 POU4F1Q01851 419 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 EIF4EBP2Q13542 120 aaPredicted RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 SLMAPQ14BN4 828 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 PCGF5Q86SE9 256 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 CDKL3Q8IVW4 592 aaPredicted RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 CISD2Q8N5K1 135 aaKnown RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 TTC9BQ8N6N2 239 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 POF1BQ8WVV4 589 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 FBXO32Q969P5 355 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 MED4Q9NPJ6 270 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 CLIC5Q9NZA1 410 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 CWC15Q9P013 229 aaKnown RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 AFF4Q9UHB7 1163 aaKnown RBP8.94□□□□□ -0.98
TPM3-213ENST00000368545 MAFFQ9ULX9 164 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 SSX2IPQ9Y2D8 614 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 RAD54BQ9Y620 910 aa8.94□□□□□ -0.98
TPM3-213ENST00000368545 BRWD1Q9NSI6 2320 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms