RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LRRC19Q9H756 370 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 PDFQ9HBH1 243 aa16.19■□□□□ 0.18
CKS1B-202ENST00000368436 A0A1W2PNU3 283 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-202ENST00000368436 ANKRD62A6NC57 917 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 YY2O15391 372 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 FGF10O15520 208 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-202ENST00000368436 TCEA3O75764 348 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 C1QL1O75973 258 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 TSHRP16473 764 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 HTR7P34969 479 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 RPIAP49247 311 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 PEX5P50542 639 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 MYL5Q02045 173 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 PPARDQ03181 441 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 UBXN1Q04323 297 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 ELP6Q0PNE2 266 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 GRM3Q14832 879 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 AGERQ15109 404 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 IRF4Q15306 451 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 FAXCQ5TGI0 409 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 ACAD10Q6JQN1 1059 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 DNAAF5Q86Y56 855 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 MCOLN2Q8IZK6 566 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 PRR11Q96HE9 360 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-202ENST00000368436 SUV39H2Q9H5I1 410 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
CKS1B-202ENST00000368436 ENTPD2Q9Y5L3 495 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 GCN1Q92616 2671 aaKnown RBP16.18■□□□□ 0.18
CKS1B-202ENST00000368436 KIF26BQ2KJY2 2108 aa16.18■□□□□ 0.18
CKS1B-202ENST00000368436 TMEM110-MUSTN1A8MSY1 372 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 MUSKO15146 869 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 PIGNO95427 931 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 PRB1P04280 392 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 ANXA6P08133 673 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 BLKP51451 505 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 NDST2P52849 883 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 CXADRP78310 365 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 OGDHQ02218 1023 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 C19orf57Q0VDD7 668 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 LRRC14Q15048 493 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 UGP2Q16851 508 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 WSCD2Q2TBF2 565 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 PCSK4Q6UW60 755 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 RBM44Q6ZP01 1051 aaKnown RBP16.17■□□□□ 0.18
CKS1B-202ENST00000368436 FSTL5Q8N475 847 aaPredicted RBP16.17■□□□□ 0.18
CKS1B-202ENST00000368436 WDR48Q8TAF3 677 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 NAT6Q93015 286 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 ATXN7L3BQ96GX2 97 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 NAF1Q96HR8 494 aaKnown RBP16.17■□□□□ 0.18
CKS1B-202ENST00000368436 VCPIP1Q96JH7 1222 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 EXOC2Q96KP1 924 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 ZNF641Q96N77 438 aaPredicted RBP16.17■□□□□ 0.18
CKS1B-202ENST00000368436 SLC46A1Q96NT5 459 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 DPH1Q9BZG8 443 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 HSD3B7Q9H2F3 369 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 THSD1Q9NS62 852 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 DONSONQ9NYP3 566 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 UBA2Q9UBT2 640 aaPredicted RBP16.17■□□□□ 0.18
CKS1B-202ENST00000368436 SATB2Q9UPW6 733 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 COQ6Q9Y2Z9 468 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 PCDHGA8Q9Y5G5 932 aa16.17■□□□□ 0.18
CKS1B-202ENST00000368436 J3KR12 359 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 PRAMEF11O60813 436 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 FERP16591 822 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 XPAP23025 273 aaPredicted RBP16.16■□□□□ 0.18
CKS1B-202ENST00000368436 CSNK1DP48730 415 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 HK3P52790 923 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 UCNP55089 124 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 SKOR1P84550 965 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 NCAPHQ15003 741 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 C3orf38Q5JPI3 329 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 BROXQ5VW32 411 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 DCUN1D2Q6PH85 259 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 LVRNQ6Q4G3 990 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 CRTC1Q6UUV9 634 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 SASS6Q6UVJ0 657 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 IRF2BP2Q7Z5L9 587 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 SDR16C5Q8N3Y7 309 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 NCAPGQ9BPX3 1015 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 SYT11Q9BT88 431 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 PCDH12Q9NPG4 1184 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 PADI4Q9UM07 663 aa16.16■□□□□ 0.18
CKS1B-202ENST00000368436 CFAP69A5D8W1 941 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 EIF3CLB5ME19 914 aaKnown RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CASC3O15234 703 aaKnown RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 BUB1BO60566 1050 aaPredicted RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CELA2BP08218 269 aaPredicted RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CCDC172P0C7W6 258 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 C6P13671 934 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 TMPRSS3P57727 454 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 TPI1P60174 286 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 STX1AQ16623 288 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 ALG11Q2TAA5 492 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 ESRP1Q6NXG1 681 aaKnown RBP16.15■□□□□ 0.18
CKS1B-202ENST00000368436 BRAT1Q6PJG6 821 aa16.15■□□□□ 0.18
CKS1B-202ENST00000368436 KCNE4Q8WWG9 221 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms