RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TEAD4Q15561 434 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 UGP2Q16851 508 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 KIF19Q2TAC6 998 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 KAZNQ674X7 775 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 ALG1LQ6GMV1 187 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 KIAA1161Q6NSJ0 714 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 BBS5Q8N3I7 341 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 TXLNBQ8N3L3 684 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 CCNYQ8ND76 341 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 FEM1CQ96JP0 617 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 AASDHPPTQ9NRN7 309 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 DNAAF2Q9NVR5 837 aaKnown RBP22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 SAE1Q9UBE0 346 aaPredicted RBP22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 CA5BQ9Y2D0 317 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 SNX11Q9Y5W9 270 aa22.64■■□□□ 1.22
ECHDC1-203ENST00000368291 UPK3BL1B0FP48 263 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 UPK3BL2E5RIL1 263 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CST8O60676 142 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CCNB1P14635 433 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PECAM1P16284 738 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 RPS21P63220 83 aaKnown RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 IHHQ14623 411 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 FAM182AQ5T1J6 154 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 BRAT1Q6PJG6 821 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CCDC13Q8IYE1 715 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 TMEM145Q8NBT3 493 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 ALG3Q92685 438 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 RBM41Q96IZ5 413 aaKnown RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 HERPUD2Q9BSE4 406 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 C1QTNF2Q9BXJ5 285 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 IL21RQ9HBE5 538 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 FZD3Q9NPG1 666 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 SCUBE2Q9NQ36 999 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PCDHGC4Q9Y5F7 938 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CAPN6Q9Y6Q1 641 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PCNX2A6NKB5 2137 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CCDC66A2RUB6 948 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 IGLON5A6NGN9 336 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PRAMEF26H0Y7S4 382 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 KCNK1O00180 336 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 HTRA2O43464 458 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CTSKP43235 329 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 ATXN3P54252 364 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 TFDP2Q14188 446 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PPP2R5EQ16537 467 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 RALGPS1Q5JS13 557 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 CCDC50Q8IVM0 306 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 SPOCK2Q92563 424 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 ZNF830Q96NB3 372 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 SLC17A9Q9BYT1 436 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 PCDH12Q9NPG4 1184 aa22.63■■□□□ 1.21
ECHDC1-203ENST00000368291 RBM22Q9NW64 420 aaKnown RBP eCLIP22.63■■□□□ 1.217e-6■■■■□ 24.6
ECHDC1-203ENST00000368291 DCDC2BA2VCK2 349 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 RIOK3O14730 519 aaKnown RBP22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 PRKCGP05129 697 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 HLA-DQB2P05538 268 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 HNRNPA2B1P22626 353 aaKnown RBP22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 SUOXP51687 545 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 TRAF2Q12933 501 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 ZBTB17Q13105 803 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 PDK1Q15118 436 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 HLA-BQ31612 363 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 UAP1L1Q3KQV9 507 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 TMEM52BQ4KMG9 183 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 B4GALNT4Q76KP1 1039 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 ADAT2Q7Z6V5 191 aaKnown RBP22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 CNTD1Q8N815 330 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 MFSD2AQ8NA29 543 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 IL12RB2Q99665 862 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 MYOCQ99972 504 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 SEMA3CQ99985 751 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 GAREM1Q9H706 876 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 AMACRQ9UHK6 382 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 AMFRQ9UKV5 643 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 PACSIN2Q9UNF0 486 aaPredicted RBP22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 ATP8A1Q9Y2Q0 1164 aa22.62■■□□□ 1.21
ECHDC1-203ENST00000368291 TDRD6O60522 2096 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 CNOT1A5YKK6 2376 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 NEMP1O14524 444 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 KCNK3O14649 394 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 RAD51BO15315 384 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 SOCS5O75159 536 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 PAK4O96013 591 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 JCHAINP01591 159 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 TGM2P21980 687 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 NR2C2P49116 596 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 COPS2P61201 443 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 IFI35P80217 286 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 DSC2Q02487 901 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 AADACL2Q6P093 401 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 ZSCAN30Q86W11 494 aa22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 RNF10Q8N5U6 811 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 KLF6Q99612 283 aaPredicted RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 POLR1EQ9GZS1 481 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 FNDC3AQ9Y2H6 1198 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-203ENST00000368291 H0Y8X5 98 aa22.6■■□□□ 1.21
ECHDC1-203ENST00000368291 MMP20O60882 483 aa22.6■■□□□ 1.21
ECHDC1-203ENST00000368291 FTCDO95954 541 aa22.6■■□□□ 1.21
ECHDC1-203ENST00000368291 XPAP23025 273 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms