RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 PDCD6IPQ8WUM4 868 aaKnown RBP13.8□□□□□ -0.2
MRPL55-205ENST00000366731 RFFLQ8WZ73 363 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-205ENST00000366731 SCUBE2Q9NQ36 999 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 MBNL1Q9NR56 388 aaKnown RBP13.8□□□□□ -0.2
MRPL55-205ENST00000366731 DNAJC28Q9NX36 388 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-205ENST00000366731 FTSJ1Q9UET6 329 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 KLK13Q9UKR3 277 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 WASF3Q9UPY6 502 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 PCDHGC4Q9Y5F7 938 aa13.8□□□□□ -0.2
MRPL55-205ENST00000366731 CHD5Q8TDI0 1954 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 YKT6O15498 198 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 TNFSF14O43557 240 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 LDOC1O95751 146 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 KDELR1P24390 212 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 MAN1A1P33908 653 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 RXRGP48443 463 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 ITKQ08881 620 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 ELP6Q0PNE2 266 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 PDE1CQ14123 709 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 MARC1Q5VT66 337 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 ERAP2Q6P179 960 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 OXR1Q8N573 874 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 BAHD1Q8TBE0 780 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 CNDP2Q96KP4 475 aaKnown RBP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 LENG8Q96PV6 779 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-205ENST00000366731 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 UCKL1Q9NWZ5 548 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 LCMT1Q9UIC8 334 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
MRPL55-205ENST00000366731 TSPAN11A1L157 253 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
MRPL55-205ENST00000366731 FFAR2O15552 330 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 LZTS3O60299 673 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-205ENST00000366731 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
MRPL55-205ENST00000366731 ARHGAP25P42331 645 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 MMP13P45452 471 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 RABIFP47224 123 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 LIG3P49916 1009 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 AP1S1P61966 158 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 GBE1Q04446 702 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 DNAJC3Q13217 504 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 TMEM52BQ4KMG9 183 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 TPRG1LQ5T0D9 272 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 FAM182AQ5T1J6 154 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
MRPL55-205ENST00000366731 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 PQLC3Q8N755 202 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-205ENST00000366731 CENPTQ96BT3 561 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 DOCK9Q9BZ29 2069 aa13.78□□□□□ -0.2
MRPL55-205ENST00000366731 ENC1O14682 589 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 TRIM16O95361 564 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 KRT1P04264 644 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 C6P13671 934 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 COMTP21964 271 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 DGKAP23743 735 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 IGFALSP35858 605 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 SUOXP51687 545 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 GALNT2Q10471 571 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 SLC10A2Q12908 348 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-205ENST00000366731 FZD2Q14332 565 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 PAFAH1B3Q15102 231 aaKnown RBP13.77□□□□□ -0.21
MRPL55-205ENST00000366731 IRF4Q15306 451 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 SPA17Q15506 151 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 RAB44Q7Z6P3 723 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-205ENST00000366731 ZSCAN30Q86W11 494 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 MARCH9Q86YJ5 346 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 SLC25A45Q8N413 288 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 CCNYQ8ND76 341 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 ASB12Q8WXK4 309 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 RNF157Q96PX1 679 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 C1QTNF7Q9BXJ2 289 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 MAK16Q9BXY0 300 aaKnown RBP13.77□□□□□ -0.21
MRPL55-205ENST00000366731 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 PCDHA13Q9Y5I0 950 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 TMEM131Q92545 1883 aa13.77□□□□□ -0.21
MRPL55-205ENST00000366731 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
MRPL55-205ENST00000366731 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-205ENST00000366731 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
MRPL55-205ENST00000366731 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
MRPL55-205ENST00000366731 TRIM38O00635 465 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms