RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 GAGE10A6NGK3 116 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 KLK8O60259 260 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 SERPINI2O75830 405 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 VNN2O95498 520 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 PPP1R3DO95685 299 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 HEXAP06865 529 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 FCGR1AP12314 374 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 HOXB6P17509 224 aaKnown RBP3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ITGAXP20702 1163 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 FMO4P31512 558 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 HDAC4P56524 1084 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 UFM1P61960 85 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 RPP30P78346 268 aaKnown RBP3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 GRSF1Q12849 480 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 CAMK1Q14012 370 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ARHGEF6Q15052 776 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 TAF11Q15544 211 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 GPR68Q15743 365 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ASIC2Q16515 512 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 KLHL22Q53GT1 634 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 DCAF6Q58WW2 860 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 NADSYN1Q6IA69 706 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 CCDC129Q6ZRS4 1044 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 AADATQ8N5Z0 425 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ZCCHC10Q8TBK6 192 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 SNAPC3Q92966 411 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 RNF125Q96EQ8 232 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ZC3HAV1LQ96H79 300 aaKnown RBP3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 SLCO5A1Q9H2Y9 848 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 CD93Q9NPY3 652 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 C20orf141Q9NUB4 165 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 OCIAD1Q9NX40 245 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 PDP2Q9P2J9 529 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 CRYL1Q9Y2S2 319 aa3.31□□□□□ -1.88
RNU4-48P-201ENST00000365559 ARID4BQ4LE39 1312 aaPredicted RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 TEX13CA0A0J9YWL9 993 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 SRRM3A6NNA2 597 aaPredicted RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 CH25HO95992 272 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 PCNAP12004 261 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 POU1F1P28069 291 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 KIF5AQ12840 1032 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 TRAF2Q12933 501 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 GRIK3Q13003 919 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 NFATC4Q14934 902 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 HLFQ16534 295 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 BAK1Q16611 211 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 PRICKLE4Q2TBC4 344 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 SLC9B1Q4ZJI4 515 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 NAA35Q5VZE5 725 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 DHX40Q8IX18 779 aaKnown RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 RBMXL3Q8N7X1 1067 aaKnown RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 C11orf65Q8NCR3 313 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 LMO3Q8TAP4 145 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 CTAGE1Q96RT6 745 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 FIZ1Q96SL8 496 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 EIF2AK1Q9BQI3 630 aaKnown RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 MXRA8Q9BRK3 442 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 GLIS2Q9BZE0 524 aaPredicted RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 TM6SF1Q9BZW5 370 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 IL25Q9H293 177 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 MYH16Q9H6N6 1097 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 CISD1Q9NZ45 108 aaKnown RBP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 CARD8Q9Y2G2 431 aa3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU4-48P-201ENST00000365559 PLEKHD1A6NEE1 506 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 NPIPB11E5RHQ5 1161 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 LDLRAD4O15165 306 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 HSPA12AO43301 675 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 ZBTB11O95625 1053 aaPredicted RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 AGR2O95994 175 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 FGF3P11487 239 aaPredicted RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 COX7A2P14406 83 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 ABCD3P28288 659 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 SSTR2P30874 369 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 COMPP49747 757 aaPredicted RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 SEC61A1P61619 476 aaKnown RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 DHX34Q14147 1143 aaKnown RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 FAM69BQ5VUD6 431 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 TXNDC8Q6A555 127 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 CAPRIN2Q6IMN6 1127 aaKnown RBP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 PRSS57Q6UWY2 283 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 CREB3L2Q70SY1 520 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 SHFQ7M4L6 423 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 C16orf82Q7Z2V1 217 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 ARMC9Q7Z3E5 817 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 TDRPQ86YL5 185 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 PGBD5Q8N414 524 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 PPM1EQ8WY54 764 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 ST8SIA4Q92187 359 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 KIF1BPQ96EK5 621 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 KLHL15Q96M94 604 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 LRFN5Q96NI6 719 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 BBS4Q96RK4 519 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 SIN3AQ96ST3 1273 aa3.29□□□□□ -1.88
RNU4-48P-201ENST00000365559 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms