RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 MARK3P27448 753 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 TTKP33981 857 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 PIGAP37287 484 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CDKN1AP38936 164 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 MCM2P49736 904 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 FUT6P51993 359 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 RBM5P52756 815 aaKnown RBP eCLIP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 HDAC4P56524 1084 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 TNFAIP2Q03169 654 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF155Q12901 538 aaPredicted RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 PUM3Q15397 648 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 OASLQ15646 514 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 SMAD1Q15797 465 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 SYT16Q17RD7 645 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 AMZ1Q400G9 498 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ATP13A5Q4VNC0 1218 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 C14orf177Q52M58 125 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 GJB7Q6PEY0 223 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 SLC9B2Q86UD5 537 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZC3HC1Q86WB0 502 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 EPHX4Q8IUS5 362 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CIARTQ8N365 385 aaPredicted RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 DNAAF1Q8NEP3 725 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZMIZ2Q8NF64 920 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 DBF4BQ8NFT6 615 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 LNX1Q8TBB1 728 aaPredicted RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CREB3L4Q8TEY5 395 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 KTI12Q96EK9 354 aaPredicted RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 TMEM19Q96HH6 336 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 RMDN3Q96TC7 470 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ANP32EQ9BTT0 268 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 TRMT61BQ9BVS5 477 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 GFRA4Q9GZZ7 299 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF696Q9H7X3 374 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 PTPRHQ9HD43 1115 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 NLRC4Q9NPP4 1024 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ENTPD7Q9NQZ7 604 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 TLR8Q9NR97 1041 aaKnown RBP2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CYSLTR2Q9NS75 346 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 ABCF3Q9NUQ8 709 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 DACT1Q9NYF0 836 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 KCNS2Q9ULS6 477 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 CNPY2Q9Y2B0 182 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 LRCH1Q9Y2L9 728 aa2.39□□□□□ -2.03
RNU4-42P-201ENST00000364738 A0A1B0GU03 582 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 RGS11O94810 467 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 AMBPP02760 352 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 MYL1P05976 194 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 FGF5P12034 268 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 BRWD1-AS2P59051 145 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 GLIPR1L2Q4G1C9 344 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF484Q5JVG2 852 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 SH2D4BQ5SQS7 431 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 CES5AQ6NT32 575 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 FAM122CQ6P4D5 195 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 CCNI2Q6ZMN8 369 aaPredicted RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 DGLUCYQ7Z3D6 616 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 CHD1LQ86WJ1 897 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 LURAP1LQ8IV03 231 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 DMBX1Q8NFW5 382 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 LINS1Q8NG48 757 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 SNED1Q8TER0 1413 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 ERGIC1Q969X5 290 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 RBM17Q96I25 401 aaKnown RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 ELAC2Q9BQ52 826 aaKnown RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 POLR3GLQ9BT43 218 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 NPLQ9BXD5 320 aaPredicted RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 TAF1DQ9H5J8 278 aaPredicted RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 G6PC2Q9NQR9 355 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 DDX43Q9NXZ2 648 aaKnown RBP2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 TAAR2Q9P1P5 351 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 CDC14AQ9UNH5 594 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF711Q9Y462 761 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 PSAT1Q9Y617 370 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 CLSPNQ9HAW4 1339 aa2.38□□□□□ -2.03
RNU4-42P-201ENST00000364738 TYW5A2RUC4 315 aaKnown RBP2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF587BE7ETH6 402 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 EBAG9O00559 213 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 WNT9BO14905 357 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 MID1O15344 667 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 NDUFS7O75251 213 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 RFPL2O75678 378 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF883P0CG24 379 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 RNF224P0DH78 156 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 TNNT1P13805 278 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 TIMP3P35625 211 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 IL15P40933 162 aaPredicted RBP2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 PRKAA2P54646 552 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 PMP22Q01453 160 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 ICA1Q05084 483 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 ARHGEF6Q15052 776 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 EFNB3Q15768 340 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 FBXO43Q4G163 708 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 PAPPA-AS1Q5QFB9 102 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 IRAK1BP1Q5VVH5 260 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 ZNF772Q68DY9 489 aaPredicted RBP2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 NAPEPLDQ6IQ20 393 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 MYPOPQ86VE0 399 aaPredicted RBP2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 SATL1Q86VE3 508 aa2.37□□□□□ -2.03
RNU4-42P-201ENST00000364738 SPEM1Q8N4L4 309 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms