RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HIST1H2AHQ96KK5 128 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 HIST1H2AJQ99878 128 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 H2AFJQ9BTM1 129 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 TAS2R13Q9NYV9 303 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 DNAJB4Q9UDY4 337 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 ZDHHC2Q9UIJ5 367 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 VWA7Q9Y334 891 aa14□□□□□ -0.17
COL6A1-201ENST00000361866 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PPEF2O14830 753 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ALDOAP04075 364 aaKnown RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CCNA2P20248 432 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PRKCHP24723 683 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 OR1E1P30953 314 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ZFP42Q96MM3 310 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PPP1R2P1Q96PQ5 205 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 FTHL17Q9BXU8 183 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 VPS45Q9NRW7 570 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CBX4O00257 560 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 FOXD2O60548 495 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 FGF3P11487 239 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PTPN3P26045 913 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CXCR3P49682 368 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PWP1Q13610 501 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 SDHAF4Q5VUM1 108 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 C11orf74Q86VG3 221 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ABCG8Q9H221 673 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 PDZD7Q9H5P4 517 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 USP29Q9HBJ7 922 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ZFP14Q9HCL3 533 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 TRNAU1APQ9NX07 287 aaKnown RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 A0A087X1B8 175 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 FFAR3O14843 346 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 GPR42O15529 346 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 MSI1O43347 362 aaKnown RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 RAMP2O60895 175 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 IPO13O94829 963 aaKnown RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ARHGEF7Q14155 803 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 DLK2Q6UY11 383 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 ZNF554Q86TJ5 538 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 LPCAT1Q8NF37 534 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 HEXDCQ8WVB3 486 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CCDC106Q9BWC9 280 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 DPY30Q9C005 99 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 TMEM161AQ9NX61 479 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CACNG4Q9UBN1 327 aa13.99□□□□□ -0.17
COL6A1-201ENST00000361866 CCL15-CCL14A0A0B4J2E2 113 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 E7ENX8 843 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SERPINF2P08697 491 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CCL15Q16663 113 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SYPL2Q5VXT5 272 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ARHGAP17Q68EM7 881 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 OVOS1Q6IE37 1185 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SLC44A2Q8IWA5 706 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 C8orf59Q8N0T1 100 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 IMPAD1Q9NX62 359 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ZNF142P52746 1687 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 A8MX80 341 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 E7ESA3 106 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 KPNA4O00629 521 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 AZIN1O14977 448 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 H6PDO95479 791 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CPSF4O95639 269 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TLR1Q15399 786 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CACHD1Q5VU97 1274 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PKN3Q6P5Z2 889 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CTU1Q7Z7A3 348 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 RIOX2Q8IUF8 465 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CLYBLQ8N0X4 340 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 FBXO32Q969P5 355 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 MTFMTQ96DP5 389 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 COLEC11Q9BWP8 271 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 EIF2AQ9BY44 585 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PARVBQ9HBI1 364 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 GBA2Q9HCG7 927 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SIX4Q9UIU6 781 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CNTRLQ7Z7A1 2325 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CITO14578 2027 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 MOXD2PA6NHM9 499 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TPD52L2O43399 206 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 LRIG2O94898 1065 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 WDR47O94967 919 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 DMPKQ09013 629 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PRAMEF19Q5SWL8 479 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TMEM214Q6NUQ4 689 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ZYG11AQ6WRX3 759 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ANKRD23Q86SG2 305 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 LPPQ93052 612 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 OTULINQ96BN8 352 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 SMARCD1Q96GM5 515 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms