RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 BCAS2O75934 225 aaPredicted RBP16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 THRBP10828 461 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 CLCN5P51795 746 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 TATDN1Q6P1N9 297 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 SCIMPQ6UWF3 145 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 C19orf18Q8NEA5 215 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 ENKURQ8TC29 256 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 QKIQ96PU8 341 aaKnown RBP eCLIP16.08■□□□□ 0.161e-6■■■■□ 23.1
CLSTN1-201ENST00000361311 HGH1Q9BTY7 390 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 PNMA8BQ9ULN7 279 aaPredicted RBP16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 IPPQ9Y573 584 aa16.08■□□□□ 0.16
CLSTN1-201ENST00000361311 RFPL1O75677 317 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 TRIM32Q13049 653 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 FSCN1Q16658 493 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 PGS1Q32NB8 556 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 OGFOD2Q6N063 350 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 RRM2BQ7LG56 351 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 ASIC4Q96FT7 647 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 B3GNT5Q9BYG0 378 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 CD320Q9NPF0 282 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 FAM8A1Q9UBU6 413 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 CD3EAPO15446 510 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 PRKCHP24723 683 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 HARS2P49590 506 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 PHF21AQ96BD5 680 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF696Q9H7X3 374 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 TAS2R13Q9NYV9 303 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 C9JVG2 144 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF197O14709 1029 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 DENRO43583 198 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 FAM189A1O60320 539 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 ANXA6P08133 673 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 IDO1P14902 403 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 NUMBP49757 651 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 BCAP31P51572 246 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 HERC3Q15034 1050 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 MOGQ16653 247 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 TMEM126BQ8IUX1 230 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 FSTL5Q8N475 847 aaPredicted RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 IPO13O94829 963 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 VNN1O95497 513 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 LINC00032P0C843 101 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 SLC2A3P11169 496 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 YAP1P46937 504 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 RHDQ02161 417 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 TRAP1Q12931 704 aaKnown RBP16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 IKBKEQ14164 716 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 DENND5AQ6IQ26 1287 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 UGT3A1Q6NUS8 523 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 ABI1Q8IZP0 508 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 SNX8Q9Y5X2 465 aa16.07■□□□□ 0.16
CLSTN1-201ENST00000361311 G3V2T6 193 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 KRT20P35900 424 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 PSMD5Q16401 504 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 MARC1Q5VT66 337 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 BBS7Q8IWZ6 715 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 CDT1Q9H211 546 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 RPRD1BQ9NQG5 326 aaKnown RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 DUSP12Q9UNI6 340 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 TNFRSF21O75509 655 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 ZNF37AP17032 561 aaPredicted RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 BACE1P56817 501 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 CDC42EP1Q00587 391 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 ECT2LQ008S8 904 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 TNFAIP8L3Q5GJ75 292 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 EPGNQ6UW88 154 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 KBTBD8Q8NFY9 601 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 ISOC1Q96CN7 298 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 GLIS2Q9BZE0 524 aaPredicted RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 C5orf58C9J3I9 102 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 MFSD11O43934 449 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 TIMM50Q3ZCQ8 353 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 EEF1DP3Q658K8 133 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 GLYATQ6IB77 296 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 OTULINQ96BN8 352 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 C2orf81A6NN90 581 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 HNRNPCL2B2RXH8 293 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 E7ESA3 106 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 FBP2O00757 339 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 RFX4Q33E94 735 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 MGAT5BQ3V5L5 792 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 DACT2Q5SW24 774 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 OGFRL1Q5TC84 451 aaPredicted RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 TMEM214Q6NUQ4 689 aaKnown RBP16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 NIPAL1Q6NVV3 410 aa16.06■□□□□ 0.16
CLSTN1-201ENST00000361311 IL27RAQ6UWB1 636 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms