RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MEA1Q16626 185 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RASGEF1AQ8N9B8 481 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SERPINB11Q96P15 392 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SEMA4BQ9NPR2 832 aaPredicted RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FBXO10Q9UK96 956 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PCDHGB3Q9Y5G1 929 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 C17orf102A2RUQ5 167 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MID1O15344 667 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PRKG2Q13237 762 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SNAPC2Q13487 334 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ARMC10Q8N2F6 343 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 HDDC3Q8N4P3 179 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TRNT1Q96Q11 434 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 IFT80Q9P2H3 777 aaPredicted RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 BBIP1A8MTZ0 92 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CYB561D2O14569 222 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 GPR182O15218 404 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TOP3BO95985 862 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FSHRP23945 695 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PSMD5Q16401 504 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 LENG9Q96B70 501 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MYBL2P10244 700 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MGAT1P26572 445 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ANO7Q6IWH7 933 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RASAL3Q86YV0 1011 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CDYL2Q8N8U2 506 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TSEN15Q8WW01 171 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PHB2Q99623 299 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ANKZF1Q9H8Y5 726 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 OVOS2A0A0J9YW53 1432 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 OVOS2Q6IE36 1432 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RIPPLY1Q0D2K3 151 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 C16orf86Q6ZW13 317 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 APBA2Q99767 749 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MRPL57Q9BQC6 102 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF780BQ9Y6R6 833 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 UMODL1Q5DID0 1318 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 H3BQF6 201 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF208O43345 1280 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 BCL2L1Q07817 233 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 LYPLAL1Q5VWZ2 237 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 LRRC70Q7Z2Q7 622 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 NKAPQ8N5F7 415 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 DNAJB14Q8TBM8 379 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 IST1P53990 364 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ACMSDQ8TDX5 336 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TCF12Q99081 682 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 XKRYO14609 159 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MTFMTQ96DP5 389 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 DUSP10Q9Y6W6 482 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FADS2O95864 444 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CYB5AP00167 134 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 GPD2P43304 727 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RTL4Q6ZR62 310 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 KLQ9UEF7 1012 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PCDHA11Q9Y5I1 949 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 H7C1W4 665 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SGPL1O95470 568 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CYP4B1P13584 511 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RRM1P23921 792 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 HNF4AP41235 474 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 RBM34P42696 430 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 SIRT2Q8IXJ6 389 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 AGAP11Q8TF27 550 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PTPRHQ9HD43 1115 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 TAS2R7Q9NYW3 318 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF639Q9UID6 485 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PMF1-BGLAPU3KQ54 211 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CCDC88AQ3V6T2 1871 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 FDPSP14324 419 aaKnown RBP9.35□□□□□ -0.91
VPS13A-203ENST00000360280 MAPK9P45984 424 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ZCCHC23Q6ZST2 131 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CIPCQ9C0C6 399 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 CNTNAP5Q8WYK1 1306 aa9.35□□□□□ -0.91
VPS13A-203ENST00000360280 ZNF772Q68DY9 489 aaPredicted RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PPP3R1P63098 170 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 SLC34A3Q8N130 599 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 SEMA3GQ9NS98 782 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 CATP04040 527 aaKnown RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 ANXA5P08758 320 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 RAPSNQ13702 412 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 CHST13Q8NET6 341 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 RAD51AP1Q96B01 352 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 TMEM176AQ96HP8 235 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 NDNQ99608 321 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 SLC28A1O00337 649 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 TCF7P36402 384 aaPredicted RBP9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PDK4Q16654 411 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 RNF180Q86T96 592 aa9.34□□□□□ -0.91
VPS13A-203ENST00000360280 PANX1Q96RD7 426 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms