RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 NEPROQ6NW34 567 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 FASTKD5Q7L8L6 764 aaKnown RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 LIMS2Q7Z4I7 341 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 PAAF1Q9BRP4 392 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 GLOD4Q9HC38 313 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 CNGB3Q9NQW8 809 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 PHF24Q9UPV7 400 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 AAR2Q9Y312 384 aaKnown RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 PTGDR2Q9Y5Y4 395 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 FAM149AA5PLN7 773 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 SAC3D1A6NKF1 404 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 A8MT66 165 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 SLC7A2P52569 658 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 STX5Q13190 355 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 LRP8Q14114 963 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 RFTN1Q14699 578 aaPredicted RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 CHERPQ8IWX8 916 aaKnown RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 PELI3Q8N2H9 469 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 RYBPQ8N488 228 aaPredicted RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 SCAMP5Q8TAC9 235 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 SH3RF2Q8TEC5 729 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 ANKRD49Q8WVL7 239 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 LPPQ93052 612 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 MAELQ96JY0 434 aaKnown RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 UNC93B1Q9H1C4 597 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 TSPYL2Q9H2G4 693 aaPredicted RBP20.91■□□□□ 0.94
TRIM3-202ENST00000359518 IGSF5Q9NSI5 407 aa20.91■□□□□ 0.94
TRIM3-202ENST00000359518 AKAP10O43572 662 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CDK4P11802 303 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 COL6A2P12110 1019 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 BDNFP23560 247 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 GRIA3P42263 894 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CXCR3P49682 368 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CLCNKBP51801 687 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 PPIL2Q13356 520 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 C3orf58Q8NDZ4 430 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 SLC2A11Q9BYW1 496 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 SLC39A8Q9C0K1 460 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 MPP6Q9NZW5 540 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 AURKCQ9UQB9 309 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 TCAF1Q9Y4C2 921 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CEPT1Q9Y6K0 416 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 OTOFQ9HC10 1997 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 ARHGAP10A1A4S6 786 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CASTOR2A6NHX0 329 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 SUPT7LO94864 414 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 HLA-DQB2P05538 268 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 CDH2P19022 906 aaPredicted RBP20.9■□□□□ 0.94
TRIM3-202ENST00000359518 HSPA13P48723 471 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 RHDQ02161 417 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 EMID1Q96A84 441 aaPredicted RBP20.9■□□□□ 0.94
TRIM3-202ENST00000359518 GAD1Q99259 594 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 BRD8Q9H0E9 1235 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 RAD54BQ9Y620 910 aa20.9■□□□□ 0.94
TRIM3-202ENST00000359518 GABRDO14764 452 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 NPHS1O60500 1241 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 TRMUO75648 421 aaKnown RBP20.89■□□□□ 0.94
TRIM3-202ENST00000359518 SEC24DO94855 1032 aaPredicted RBP20.89■□□□□ 0.94
TRIM3-202ENST00000359518 HK2P52789 917 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 MAXP61244 160 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 HMBOX1Q6NT76 420 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 TMEM126BQ8IUX1 230 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 CANT1Q8WVQ1 401 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 DPF3Q92784 378 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 ALG9Q9H6U8 611 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 SPAG4Q9NPE6 437 aa20.89■□□□□ 0.94
TRIM3-202ENST00000359518 RRN3P2A6NIE6 340 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 LRPAP1P30533 357 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 ETFBP38117 255 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 KCNC1P48547 511 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 GALK1P51570 392 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 ITKQ08881 620 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 ZBTB49Q6ZSB9 765 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 NUP93Q8N1F7 819 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 DQX1Q8TE96 717 aaKnown RBP20.89■□□□□ 0.93
TRIM3-202ENST00000359518 HASPINQ8TF76 798 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 EGFL7Q9UHF1 273 aa20.89■□□□□ 0.93
TRIM3-202ENST00000359518 PDLIM1O00151 329 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 PPP6CO00743 305 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 PFDN1O60925 122 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 IPO13O94829 963 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 SLC4A1P02730 911 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 SNRPB2P08579 225 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 SH3BGRP55822 239 aaPredicted RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 TMEM259Q4ZIN3 620 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 BHLHA9Q7RTU4 235 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 ARHGAP12Q8IWW6 846 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 ABTB1Q969K4 478 aaPredicted RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 RPL10LQ96L21 214 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 CNOT6Q9ULM6 557 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 TMCO1Q9UM00 188 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 UBFD1O14562 309 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 HSPA1AP0DMV8 641 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 HSPA1BP0DMV9 641 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 AIF1P55008 147 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 HPCAP84074 193 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 GEN1Q17RS7 908 aa20.88■□□□□ 0.93
TRIM3-202ENST00000359518 INTS6LQ5JSJ4 861 aaKnown RBP20.88■□□□□ 0.93
TRIM3-202ENST00000359518 PIM3Q86V86 326 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms