RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 EPOP01588 193 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FGF1P05230 155 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 PSMC3P17980 439 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 CA4P22748 312 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FCARP24071 287 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 PRKCHP24723 683 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 MSH2P43246 934 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 RGRP47804 291 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 SCNN1BP51168 640 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 AP1S1P61966 158 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 NSUN2Q08J23 767 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FCHO2Q0JRZ9 810 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 NR1H3Q13133 447 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 NAB1Q13506 487 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 EFTUD2Q15029 972 aaKnown RBP eCLIP13.98□□□□□ -0.175e-8■□□□□ 11.1
PDLIM5-203ENST00000359265 TMED2Q15363 201 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 SKIDA1Q1XH10 827 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FUT11Q495W5 492 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 PCID2Q5JVF3 399 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 CERCAMQ5T4B2 595 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 DENND5AQ6IQ26 1287 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 ZNF449Q6P9G9 518 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 MFSD6LQ8IWD5 586 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 AHI1Q8N157 1196 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC25A41Q8N5S1 370 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 TMEM105Q8N8V8 129 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FAM76AQ8TAV0 307 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 WFIKKN2Q8TEU8 576 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 CDKL2Q92772 493 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 TLCD1Q96CP7 247 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 LRRC3BQ96PB8 259 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 INTS6Q9UL03 887 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 FCF1Q9Y324 198 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 IKBKGQ9Y6K9 419 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 RPS6KL1Q9Y6S9 549 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 LOC285095A0A1B0GVY8 99 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TTC24A2A3L6 582 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 NDST3O95803 873 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 IGSF6O95976 241 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 INHBAP08476 426 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TPH1P17752 444 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 CHRNA4P43681 627 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 MAPK8P45983 427 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 NUBP1P53384 320 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 CDK18Q07002 472 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SEPT6Q14141 434 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 FRG1Q14331 258 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 KBTBD12Q3ZCT8 623 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SIRPB2Q5JXA9 342 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TANGO2Q6ICL3 276 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 PKN3Q6P5Z2 889 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 VITQ6UXI7 678 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 CYS1Q717R9 158 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SRLQ86TD4 932 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 CTAGE3PQ8IX95 158 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SH2D3CQ8N5H7 860 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 ARFGAP2Q8N6H7 521 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TTC17Q96AE7 1141 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 RANBP9Q96S59 729 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 KIFC1Q9BW19 673 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 PLAC1Q9HBJ0 212 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 NOD2Q9HC29 1040 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 EURLQ9NYK6 297 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 CTNNAL1Q9UBT7 734 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 HS3ST2Q9Y278 367 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TCAF1Q9Y4C2 921 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 ZNF292O60281 2723 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 ACACBO00763 2458 aa13.97□□□□□ -0.17
PDLIM5-203ENST00000359265 TICRRQ7Z2Z1 1910 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 HEATR9A2RTY3 570 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 GJB3O75712 270 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ALDH1A2O94788 518 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ARSAP15289 507 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 NR1D1P20393 614 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ADRA1DP25100 572 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 GCAP28676 217 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 CSNK1DP48730 415 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 DGKGP49619 791 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 MGAT5Q09328 741 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 LAMB3Q13751 1172 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 IHHQ14623 411 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 POU6F1Q14863 301 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TNFAIP8L3Q5GJ75 292 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 C22orf39Q6P5X5 142 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 MARK2Q7KZI7 788 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TAOK1Q7L7X3 1001 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms