RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 BHLHB9Q6PI77 547 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 WASH2PQ6VEQ5 465 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MAB21L3Q8N8X9 362 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 BORCS8Q96FH0 119 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ZFP14Q9HCL3 533 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 KLC4Q9NSK0 619 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ABCA6Q8N139 1617 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CCDC182A6NF36 153 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ADM5C9JUS6 153 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MED26O95402 600 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CYP1A2P05177 515 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SERPINA4P29622 427 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 S100A3P33764 101 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CBX2Q14781 532 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 PABPC1LQ4VXU2 614 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 SLC8B1Q6J4K2 584 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 INTS5Q6P9B9 1019 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 S100ZQ8WXG8 99 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 VPS33BQ9H267 617 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TMLHEQ9NVH6 421 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CLN6Q9NWW5 311 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 A8MUI8 341 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 FSHRP23945 695 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 EIF1AXP47813 144 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 CYP4F8P98187 520 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SLC20A2Q08357 652 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TAB1Q15750 504 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TMEM164Q5U3C3 297 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 OR6K2Q8NGY2 324 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ART5Q96L15 291 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 C8orf48Q96LL4 319 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MXRA8Q9BRK3 442 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MRM3Q9HC36 420 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 BRD7Q9NPI1 651 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TMPRSS4Q9NRS4 437 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 KANSL3Q9P2N6 904 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 PVALEFA0A1B0GWK0 134 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SIN3BO75182 1162 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 FMO5P49326 533 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 NAB1Q13506 487 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 HGSNATQ68CP4 663 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TSHZ1Q6ZSZ6 1077 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 POLNQ7Z5Q5 900 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 STK32CQ86UX6 486 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CPA6Q8N4T0 437 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TRIM9Q9C026 710 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 NIF3L1Q9GZT8 377 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CROCC2H7BZ55 1655 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 A0A087X0B3 334 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 NOL4O94818 638 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 DRD4P21917 467 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ALDH4A1P30038 563 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ECHS1P30084 290 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 HYAL2Q12891 473 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MAD2L1Q13257 205 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 MFSD10Q14728 455 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 NR1D2Q14995 579 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 MAD2L1BPQ15013 274 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 RDH11Q8TC12 318 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 PTCD2Q8WV60 388 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 DNAJC9Q8WXX5 260 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TBL1YQ9BQ87 522 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 WDR27A2RRH5 827 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 GRID2IPA4D2P6 1211 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ARP10275 920 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SAGP10523 405 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 COMTP21964 271 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 TUBG1P23258 451 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 SCNN1GP51170 649 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 GXYLT1Q4G148 440 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 FSTL5Q8N475 847 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 FBXO36Q8NEA4 188 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ARMC5Q96C12 935 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 CNDP2Q96KP4 475 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 OSBPL8Q9BZF1 889 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
CHD3-202ENST00000358181 ELAC1Q9H777 363 aaKnown RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 UBA2Q9UBT2 640 aaPredicted RBP9.82□□□□□ -0.84
CHD3-202ENST00000358181 L7N2F9 121 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 OR1I1O60431 355 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SERPINF2P08697 491 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 CFL1P23528 166 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 MAGEA2P43356 314 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 VAMP2P63027 116 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PRAMEF19Q5SWL8 479 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 RNF43Q68DV7 783 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ATG14Q6ZNE5 492 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SVOPQ8N4V2 548 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ZBTB10Q96DT7 871 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 CCDC126Q96EE4 140 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 WDR77Q9BQA1 342 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 BCAS3Q9H6U6 928 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ASF1AQ9Y294 204 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 KLRC1P26715 233 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms