RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MRPS6P82932 125 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 CIR1Q86X95 450 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 TTC16Q8NEE8 873 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 RDH11Q8TC12 318 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 ZC3H15Q8WU90 426 aaKnown RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 TRIM8Q9BZR9 551 aa20.61■□□□□ 0.89
COL13A1-202ENST00000357811 ABI2Q9NYB9 513 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-202ENST00000357811 MATN3O15232 486 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 DSC2Q02487 901 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 SLC10A7Q0GE19 358 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 ADGRE1Q14246 886 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 CYTH1Q15438 398 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 GPR158Q5T848 1215 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 AMIGO2Q86SJ2 522 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 CEP70Q8NHQ1 597 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 HMGCLL1Q8TB92 370 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 FAM110BQ8TC76 370 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 DNAJC1Q96KC8 554 aaKnown RBP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 MRPL1Q9BYD6 325 aaKnown RBP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 IGSF5Q9NSI5 407 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 RIMS3Q9UJD0 308 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 LRRC14BA6NHZ5 514 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 A8MT66 165 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 CASQ2O14958 399 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 MGEA5O60502 916 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 GPC4O75487 556 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 SUPT7LO94864 414 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 TBX18O95935 607 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 CSRP3P50461 194 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 ARSDP51689 593 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 PSME3P61289 254 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 PURAQ00577 322 aaKnown RBP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 MAP2K5Q13163 448 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 IHHQ14623 411 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 GEN1Q17RS7 908 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 MAP3K21Q5TCX8 1036 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 GDF6Q6KF10 455 aaPredicted RBP20.6■□□□□ 0.89
COL13A1-202ENST00000357811 ZNF385DQ9H6B1 395 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 OSER1Q9NX31 292 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 NSMCE4AQ9NXX6 385 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 LZTS1Q9Y250 596 aa20.6■□□□□ 0.89
COL13A1-202ENST00000357811 A0A1W2PQH9 124 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 HAPLN1P10915 354 aaPredicted RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 CCR1P32246 355 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 FAM83EQ2M2I3 478 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 OVOS1Q6IE37 1185 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 CUZD1Q86UP6 607 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 MRPL57Q9BQC6 102 aaKnown RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 C6orf203Q9P0P8 240 aaPredicted RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 VTI1BQ9UEU0 232 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 HS3ST4Q9Y661 456 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 E9PAM4 449 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 CNTN5O94779 1100 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 ODC1P11926 461 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 GEMP55040 296 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 FASTKQ14296 549 aaKnown RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 DDR2Q16832 855 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 SPPL2BQ8TCT7 592 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 EME1Q96AY2 570 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 IL12RB2Q99665 862 aa20.59■□□□□ 0.89
COL13A1-202ENST00000357811 UBE2OQ9C0C9 1292 aaKnown RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 MARCH4Q9P2E8 410 aaPredicted RBP20.59■□□□□ 0.89
COL13A1-202ENST00000357811 ATP5F1P24539 256 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 HADHAP40939 763 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 METTL23Q86XA0 190 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 C2CD4AQ8NCU7 369 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 B4GALNT2Q8NHY0 566 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 LRTOMTQ8WZ04 291 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 ITFG2Q969R8 447 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 HDAC10Q969S8 669 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 DSEQ9UL01 958 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 SMIM18P0DKX4 95 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 ADRA1AP35348 466 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 RANBP10Q6VN20 620 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 ANKRD23Q86SG2 305 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 SCD5Q86SK9 330 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 MIB1Q86YT6 1006 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 CPSF7Q8N684 471 aaKnown RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 NAT14Q8WUY8 206 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 EZH1Q92800 747 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 CSNK1G1Q9HCP0 422 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 SNX13Q9Y5W8 968 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 MYLKQ15746 1914 aa20.58■□□□□ 0.89
COL13A1-202ENST00000357811 DICER1Q9UPY3 1922 aaKnown RBP20.58■□□□□ 0.89
COL13A1-202ENST00000357811 UBDO15205 165 aa20.58■□□□□ 0.88
COL13A1-202ENST00000357811 SOAT2O75908 522 aa20.58■□□□□ 0.88
COL13A1-202ENST00000357811 SIX3O95343 332 aaPredicted RBP20.58■□□□□ 0.88
COL13A1-202ENST00000357811 CDKN2DP55273 166 aa20.58■□□□□ 0.88
COL13A1-202ENST00000357811 FRG1Q14331 258 aaKnown RBP20.58■□□□□ 0.88
COL13A1-202ENST00000357811 RBM44Q6ZP01 1051 aaKnown RBP20.58■□□□□ 0.88
COL13A1-202ENST00000357811 OCEL1Q9H607 264 aa20.58■□□□□ 0.88
COL13A1-202ENST00000357811 TREX1Q9NSU2 369 aa20.58■□□□□ 0.88
COL13A1-202ENST00000357811 UBFD1O14562 309 aaKnown RBP20.57■□□□□ 0.88
COL13A1-202ENST00000357811 CLPTM1O96005 669 aa20.57■□□□□ 0.88
COL13A1-202ENST00000357811 PAMP19021 973 aa20.57■□□□□ 0.88
COL13A1-202ENST00000357811 THPOP40225 353 aa20.57■□□□□ 0.88
COL13A1-202ENST00000357811 SLC5A9Q2M3M2 681 aa20.57■□□□□ 0.88
COL13A1-202ENST00000357811 ALFQ53S48 1182 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms