RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 MEI4A8MW99 385 aa13.99□□□□□ -0.17
LSS-201ENST00000356396 WASH3PC4AMC7 463 aa13.99□□□□□ -0.17
LSS-201ENST00000356396 TMCC1O94876 653 aa13.99□□□□□ -0.17
LSS-201ENST00000356396 PKN3Q6P5Z2 889 aa13.99□□□□□ -0.17
LSS-201ENST00000356396 TDRD5Q8NAT2 981 aaKnown RBP13.99□□□□□ -0.17
LSS-201ENST00000356396 FUBP1Q96AE4 644 aaKnown RBP13.99□□□□□ -0.17
LSS-201ENST00000356396 KLF16Q9BXK1 252 aaPredicted RBP13.99□□□□□ -0.17
LSS-201ENST00000356396 MIA3Q5JRA6 1907 aa13.99□□□□□ -0.17
LSS-201ENST00000356396 C9JVG2 144 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 NCAM2O15394 837 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 PRPF4O43172 522 aaKnown RBP eCLIP13.98□□□□□ -0.171e-7■■□□□ 11.9
LSS-201ENST00000356396 MTX2O75431 263 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 IGLV3-27P01718 113 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 UGT1A6P19224 532 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 UGT1A1P22309 533 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 UGT1A4P22310 534 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 UGT1A3P35503 534 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 UGT1A5P35504 534 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 METAP1P53582 386 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 AQP5P55064 265 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 CYTH1Q15438 398 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 PLA2G4EQ3MJ16 856 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SNX30Q5VWJ9 437 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 PACS2Q86VP3 889 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 VSIG1Q86XK7 387 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 CLDN19Q8N6F1 224 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 IMP4Q96G21 291 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 SGSM3Q96HU1 749 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 RILPQ96NA2 401 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 RBBP8Q99708 897 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TMEM120AQ9BXJ8 343 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 DNMT3BQ9UBC3 853 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 VPS51Q9UID3 782 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 INTS6Q9UL03 887 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 LOC100653049A0A140TA62 436 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 KRT34O76011 436 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ATXN1LP0C7T5 689 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 HOXC13P31276 330 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ADRA1AP35348 466 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 GP5P40197 560 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SERPINH1P50454 418 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 ATXN3P54252 364 aaPredicted RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 CDKN2DP55273 166 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 CDH13P55290 713 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ZBTB16Q05516 673 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 FPGSQ05932 587 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TRAF2Q12933 501 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TSPAN33Q86UF1 283 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 PIANPQ8IYJ0 282 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 NSMCE1Q8WV22 266 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ZBP1Q9H171 429 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 UBA2Q9UBT2 640 aaPredicted RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 GIMAP2Q9UG22 337 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TRHDEQ9UKU6 1024 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SOX13Q9UN79 622 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 DNAJC16Q9Y2G8 782 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TCAF1Q9Y4C2 921 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 FAM95CA0A1B0GW59 222 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 CCDC162PA2VCL2 907 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 GOT2P00505 430 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 SLC2A3P11169 496 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 NAGLUP54802 743 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 AIF1P55008 147 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 COG7P83436 770 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 KDSRQ06136 332 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 RAB33AQ14088 237 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 HNRNPDQ14103 355 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 PCLAFQ15004 111 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 NEPROQ6NW34 567 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 NLRP9Q7RTR0 991 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ZC3HC1Q86WB0 502 aaKnown RBP13.98□□□□□ -0.17
LSS-201ENST00000356396 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 EID2BQ96D98 161 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 HBEGFQ99075 208 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 IL22Q9GZX6 179 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 TNFRSF12AQ9NP84 129 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 IL23AQ9NPF7 189 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
LSS-201ENST00000356396 KLHL14Q9P2G3 628 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 FBXO5Q9UKT4 447 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 PTGDR2Q9Y5Y4 395 aa13.98□□□□□ -0.17
LSS-201ENST00000356396 ZNF487B1APH4 448 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
LSS-201ENST00000356396 FMO4P31512 558 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 ARCN1P48444 511 aaKnown RBP13.97□□□□□ -0.17
LSS-201ENST00000356396 CORO7P57737 925 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 SLC18A2Q05940 514 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 CDK18Q07002 472 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 ACTN3Q08043 901 aaPredicted RBP13.97□□□□□ -0.17
LSS-201ENST00000356396 TMEM207Q6UWW9 146 aa13.97□□□□□ -0.17
LSS-201ENST00000356396 DDX53Q86TM3 631 aaKnown RBP13.97□□□□□ -0.17
LSS-201ENST00000356396 PPHLN1Q8NEY8 458 aaKnown RBP13.97□□□□□ -0.17
LSS-201ENST00000356396 NMUR2Q9GZQ4 415 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms