RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CSPG5O95196 566 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CD33P20138 364 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ETV4P43268 484 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CHRNA4P43681 627 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SERPINB9P50453 376 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GEMP55040 296 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ITKQ08881 620 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SERINC3Q13530 473 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 POU6F1Q14863 301 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 VEPH1Q14D04 833 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PCSK7Q16549 785 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PDK4Q16654 411 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 C5orf22Q49AR2 442 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 HSP90AA5PQ58FG0 334 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MARC1Q5VT66 337 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 KLHDC10Q6PID8 442 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 LINC00523Q86TU6 105 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PGBD5Q8N414 524 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 OR52K2Q8NGK3 314 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 AZIN2Q96A70 460 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MTBPQ96DY7 904 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TRMT2BQ96GJ1 504 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ABHD17AQ96GS6 310 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CABS1Q96KC9 395 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PRICKLE1Q96MT3 831 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 NSUN5Q96P11 429 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GSX2Q9BZM3 304 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLC13A1Q9BZW2 595 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLC25A51Q9H1U9 297 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLCO1B3Q9NPD5 702 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PCMTD2Q9NV79 361 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SMPD4Q9NXE4 827 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CPSF2Q9P2I0 782 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CDH23Q9H251 3354 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 H3BNC9 293 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 FGF18O76093 207 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 BAIAP3O94812 1187 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MMP2P08253 660 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CCNFP41002 786 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 CD86P42081 329 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MAPKAPK2P49137 400 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLC11A2P49281 568 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 RENBPP51606 427 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 EPHB3P54753 998 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 WNT3AP56704 352 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 DSC2Q02487 901 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PARP15Q460N3 678 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 KDELC1Q6UW63 502 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MICALCLQ6ZW33 695 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TCEAL8Q8IYN2 117 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 SLC25A41Q8N5S1 370 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TEX26Q8N6G2 289 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 OR7D4Q8NG98 312 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 LRRC8CQ8TDW0 803 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ZNF75CPQ92670 426 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ATP2A3Q93084 1043 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 FATE1Q969F0 183 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PLD4Q96BZ4 506 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 IMP4Q96G21 291 aaKnown RBP9.34□□□□□ -0.91
ATG4A-202ENST00000345734 FRMD6Q96NE9 622 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 KIFC1Q9BW19 673 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ZBP1Q9H171 429 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 TRPC7Q9HCX4 862 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 GGA2Q9UJY4 613 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
ATG4A-202ENST00000345734 MAGEB16A2A368 324 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 TPP1O14773 563 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 TGM5O43548 720 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 TSPAN3O60637 253 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ALDOAP04075 364 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 CNPP09543 421 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 DHRS4L1P0CG22 281 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 GMPRP36959 345 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ABCG1P45844 678 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 IL10RBQ08334 325 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 NAB1Q13506 487 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ZRSR2Q15696 482 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 SLC5A9Q2M3M2 681 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 TEDDM1Q5T9Z0 273 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 RNF187Q5TA31 235 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 RANBP10Q6VN20 620 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 TIFABQ6ZNK6 161 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 RGS9BPQ6ZS82 235 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 SPATS2Q86XZ4 545 aaKnown RBP9.33□□□□□ -0.92
ATG4A-202ENST00000345734 NDUFAF2Q8N183 169 aa9.33□□□□□ -0.92
ATG4A-202ENST00000345734 PTPRN2Q92932 1015 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms