RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 DNAJC8O75937 253 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 OR4L1Q8NH43 312 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 NSL1Q96IY1 281 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 IL1RL2Q9HB29 575 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 RASGRP1O95267 797 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 COPAP53621 1224 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 TAF5Q15542 800 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 RASIP1Q5U651 963 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 HORMAD1Q86X24 394 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 METTL6Q8TCB7 284 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 HEPHQ9BQS7 1158 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 SCOCQ9UIL1 159 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 C9IYK1 514 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 HNRNPRO43390 633 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 SCNN1AP37088 669 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 LRRC32Q14392 662 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 KYAT3Q6YP21 454 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 CMTM8Q8IZV2 173 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 ZNF614Q8N883 585 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 RTL3Q8N8U3 475 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 USP6NLQ92738 828 aa16.51■□□□□ 0.23
SMARCA4-201ENST00000344626 PABPC1P11940 636 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 ETS1P14921 441 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 WDR48Q8TAF3 677 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 ARMC7Q9H6L4 198 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 GSAPA4D1B5 854 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 NOL4O94818 638 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 SEC16BQ96JE7 1060 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 C8orf48Q96LL4 319 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 IMP3Q9NV31 184 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 RAI2Q9Y5P3 530 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 C5orf60A6NFR6 353 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 MYO1GB0I1T2 1018 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 B2RBV5 119 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 CYLC2Q14093 348 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 CEP70Q8NHQ1 597 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 PLEKHA8Q96JA3 519 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 ABCG8Q9H221 673 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 EFCAB1Q9HAE3 211 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 MID1IP1Q9NPA3 183 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 KCND1Q9NSA2 647 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 LRCH4O75427 683 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 HOXB2P14652 356 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 DLG2Q15700 870 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 PTPRNQ16849 979 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 CLEC20AQ6ZU45 233 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 DPY30Q9C005 99 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 CD207Q9UJ71 328 aa16.5■□□□□ 0.23
SMARCA4-201ENST00000344626 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 URADA6NGE7 173 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ISM1B1AKI9 464 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 KRT34O76011 436 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 MC4RP32245 332 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ILF3Q12906 894 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 CYP20A1Q6UW02 462 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 LAYNQ6UX15 382 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 UNC5AQ6ZN44 842 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ICA1LQ8NDH6 482 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 KCTD13Q8WZ19 329 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 HGH1Q9BTY7 390 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 C2CD4BA6NLJ0 364 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 PAPSS1O43252 624 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 RGS14O43566 566 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 CDK14O94921 469 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 NDST3O95803 873 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ALDH9A1P49189 494 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 CYP51A1Q16850 503 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 TRPM8Q7Z2W7 1104 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 PHC3Q8NDX5 983 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ZNF555Q8NEP9 628 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 HAPLN3Q96S86 360 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 FBXO6Q9NRD1 293 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 FCF1Q9Y324 198 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 GCATO75600 419 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 DGKIO75912 1065 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 LRIG2O94898 1065 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 CPSF4O95639 269 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 MARCKSL1P49006 195 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 HID1Q8IV36 788 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 OTULINQ96BN8 352 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 EBNA1BP2Q99848 306 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 ADAMTS10Q9H324 1103 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 IL10RBQ08334 325 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 LY6G5CQ5SRR4 150 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 HMGXB4Q9UGU5 601 aa16.49■□□□□ 0.23
SMARCA4-201ENST00000344626 RFXAPO00287 272 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 UBDO15205 165 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 CD3EAPO15446 510 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 AKAP10O43572 662 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 HCRTO43612 131 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms