RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 VPS26BQ4G0F5 336 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 EGFLAMQ63HQ2 1017 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 C18orf25Q96B23 403 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 OTUB1Q96FW1 271 aaPredicted RBP14.93□□□□□ -0.02
RRP1B-201ENST00000340648 SERPINB11Q96P15 392 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 ADGRE3Q9BY15 652 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 CXorf21Q9HAI6 301 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.93□□□□□ -0.021e-7■■■□□ 15.8
RRP1B-201ENST00000340648 DUSP12Q9UNI6 340 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 TEX264Q9Y6I9 313 aa14.93□□□□□ -0.02
RRP1B-201ENST00000340648 CDH18Q13634 790 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 KCNJ11Q14654 390 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 TEX44Q53QW1 395 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 SPANXN2Q5MJ10 180 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 PDSS2Q86YH6 399 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 FAM9CQ8IZT9 166 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 PHTF2Q8N3S3 785 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 HDAC10Q969S8 669 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 FBXL18Q96ME1 805 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 HMGXB4Q9UGU5 601 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 VWA7Q9Y334 891 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 IPO13O94829 963 aaKnown RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 AP2A1O95782 977 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 SLC5A3P53794 718 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 MFSD14CQ5VZR4 134 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 TLDC1Q6P9B6 456 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 PLPPR4Q7Z2D5 763 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 PRR11Q96HE9 360 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 OR52B2Q96RD2 323 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 MIPEPQ99797 713 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 C3orf18Q9UK00 162 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 DGKBQ9Y6T7 804 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 HOXB8P17481 243 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 GRIK3Q13003 919 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 SEMA5AQ13591 1074 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 GCNT7Q6ZNI0 430 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 CMASQ8NFW8 434 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 C19orf60Q96EN9 201 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 EPB41L4BQ9H329 900 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 TMEM245Q9H330 911 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 DTLQ9NZJ0 730 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 CDH9Q9ULB4 789 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 GPR25O00155 361 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 DHX15O43143 795 aaKnown RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 NR4A1P22736 598 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 ADRA1BP35368 520 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 IL2P60568 153 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 TOP3AQ13472 1001 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 PGLYRP2Q96PD5 576 aa14.92□□□□□ -0.02
RRP1B-201ENST00000340648 HOPXQ9BPY8 73 aaPredicted RBP14.92□□□□□ -0.02
RRP1B-201ENST00000340648 STX16-NPEPL1H3BU86 382 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 AOC1P19801 751 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 RHOAP61586 193 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ITGA7Q13683 1181 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 RIOX2Q8IUF8 465 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 TMEM132CQ8N3T6 1108 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 FSTL5Q8N475 847 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 GTF3C2Q8WUA4 911 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 GAD1Q99259 594 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 PARK7Q99497 189 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 KLQ9UEF7 1012 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 GNG14A0A1W2PPG7 69 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 FGF10O15520 208 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ABCB1P08183 1280 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 IDO1P14902 403 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 NMBRP28336 390 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 S100A3P33764 101 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 SLC25A11Q02978 314 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 PRKG2Q13237 762 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 GALNT18Q6P9A2 607 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 POTEHQ6S545 545 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 SLC26A9Q7LBE3 791 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ADCK2Q7Z695 626 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 POC5Q8NA72 575 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 TRIM45Q9H8W5 580 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ATP6V1G1O75348 118 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 CHI3L1P36222 383 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 WNT3AP56704 352 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 CBX3Q13185 183 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 FSCN1Q16658 493 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ZDHHC14Q8IZN3 488 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ZFAND2BQ8WV99 257 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 SEPT8Q92599 483 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 POLR1EQ9GZS1 481 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 PREBQ9HCU5 417 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 VPS45Q9NRW7 570 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 MGAT4DA6NG13 374 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 RGS14O43566 566 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 H6PDO95479 791 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 OAS1P00973 400 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 GNAZP19086 355 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 ENPEPQ07075 957 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 STXBP5Q5T5C0 1151 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 COX4I2Q96KJ9 171 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 EPB41L1Q9H4G0 881 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms