RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LILRA4P59901 499 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ATP1A4Q13733 1029 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 LDLRAP1Q5SW96 308 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ANKRD49Q8WVL7 239 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 LPPQ93052 612 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 KLHL5Q96PQ7 755 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 THEGQ9P2T0 379 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 MID2Q9UJV3 735 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 INPP4BO15327 924 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 NSUN2Q08J23 767 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 ESAMQ96AP7 390 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 TBL1YQ9BQ87 522 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 SPAG4Q9NPE6 437 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 RBM22Q9NW64 420 aaKnown RBP eCLIP16.25■□□□□ 0.192e-16■■■■■ 75.9
SCARB1-202ENST00000339570 FBXO5Q9UKT4 447 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 USP22Q9UPT9 525 aa16.25■□□□□ 0.19
SCARB1-202ENST00000339570 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-202ENST00000339570 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 DYNC1LI2O43237 492 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 B4GAT1O43505 415 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 SNRPB2P08579 225 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 CPB1P15086 417 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 NAA20P61599 178 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PAQR9Q6ZVX9 377 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 SETD3Q86TU7 594 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 DDI1Q8WTU0 396 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 ASB9Q96DX5 294 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 HBEGFQ99075 208 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 UPF3AQ9H1J1 476 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 UBQLN1Q9UMX0 589 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 KCTD3Q9Y597 815 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 H3BMM5 538 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 J3QRK9 145 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 DAB1O75553 588 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 BAIAP3O94812 1187 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PRKCQQ04759 706 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PPP1R8Q12972 351 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 STX5Q13190 355 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 POTEHQ6S545 545 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 GPR141Q7Z602 305 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 UNC93AQ86WB7 457 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 CHERPQ8IWX8 916 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PARP8Q8N3A8 854 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PPHLN1Q8NEY8 458 aaKnown RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 VPS33AQ96AX1 596 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 FBXL8Q96CD0 374 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 THAP11Q96EK4 314 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 HSFY1Q96LI6 401 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 TEKT5Q96M29 485 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 ARMC7Q9H6L4 198 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 OLAHQ9NV23 265 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 A8MT66 165 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 CYP2C9P11712 490 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 PCNAP12004 261 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 TPP2P29144 1249 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 CD151P48509 253 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 KCNC1P48547 511 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 STX1BP61266 288 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 ARL13BQ3SXY8 428 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 NOTUMQ6P988 496 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 FIBCD1Q8N539 461 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 MAGEE2Q8TD90 523 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-202ENST00000339570 NUDT8Q8WV74 236 aa16.24■□□□□ 0.19
SCARB1-202ENST00000339570 A0A1W2PPW3 197 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 LINC00032P0C843 101 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 BDNFP23560 247 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 RPS12P25398 132 aaKnown RBP16.23■□□□□ 0.19
SCARB1-202ENST00000339570 OXTRP30559 389 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 MAGEA12P43365 314 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 SLC26A2P50443 739 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 BTBD8Q5XKL5 378 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 PKN3Q6P5Z2 889 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 PBXIP1Q96AQ6 731 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 NSUN5Q96P11 429 aaKnown RBP16.23■□□□□ 0.19
SCARB1-202ENST00000339570 WDR6Q9NNW5 1121 aaKnown RBP16.23■□□□□ 0.19
SCARB1-202ENST00000339570 SMOXQ9NWM0 555 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 VTI1BQ9UEU0 232 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 TRPC5OSA6NMA1 111 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 NRP2O60462 931 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 FUT4P22083 530 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 NPY2RP49146 381 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 ESRRGP62508 458 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 NEPROQ6NW34 567 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 TMEM26Q6ZUK4 368 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 PCED1BQ96HM7 432 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 VPS50Q96JG6 964 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 PAAF1Q9BRP4 392 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
SCARB1-202ENST00000339570 OAZ3Q9UMX2 235 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms